Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AL591034.2-201ENST00000402839 359 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RNU6-1140P-201ENST00000410517 106 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 MRPS18CP6-201ENST00000423587 223 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC011816.1-201ENST00000441346 546 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RPL21P39-201ENST00000463605 483 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC087190.1-201ENST00000484462 480 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC093591.1-201ENST00000491435 481 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RPL21P16-201ENST00000495531 483 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS50Q96JG6 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 CBX3P7-201ENST00000532876 502 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 BNIP3P16-201ENST00000589779 534 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RPL23AP88-201ENST00000605759 454 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC010889.1-201ENST00000566193 2666 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 AC026241.1-201ENST00000517873 2142 ntBASIC3.01□□□□□ -1.93
VPS50Q96JG6 RBBP8P1-201ENST00000449447 1844 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
VPS50Q96JG6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
VPS50Q96JG6 SNORA41-201ENST00000384675 132 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 SNORD15B-201ENST00000384714 146 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 SNORD88.1-201ENST00000408684 91 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 NUP35P1-201ENST00000422734 947 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AC018865.2-201ENST00000423631 129 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AL160004.2-201ENST00000432935 350 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AC004383.1-201ENST00000438135 289 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
VPS50Q96JG6 Z75741.1-201ENST00000446793 314 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC079354.2-201ENST00000453523 154 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC068781.1-201ENST00000488231 618 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3□□□□□ -1.93
VPS50Q96JG6 Y_RNA.661-201ENST00000516003 99 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 RNU6-976P-201ENST00000516086 111 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 RN7SKP43-201ENST00000516173 320 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC107016.2-201ENST00000547968 190 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC005899.2-201ENST00000584353 90 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC007485.1-201ENST00000616755 206 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC018692.3-201ENST00000623929 123 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3□□□□□ -1.93
VPS50Q96JG6 AC000403.1-201ENST00000613696 3585 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
VPS50Q96JG6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS50Q96JG6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
VPS50Q96JG6 MTND5P9-201ENST00000503854 1755 ntBASIC3□□□□□ -1.93
VPS50Q96JG6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS50Q96JG6 RNU6-843P-201ENST00000384454 104 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 MIR544A-201ENST00000384855 91 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 RNU6-750P-201ENST00000390946 107 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 AP000275.1-201ENST00000411943 390 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS50Q96JG6 AC009414.1-201ENST00000427200 443 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS50Q96JG6 AL035666.1-201ENST00000446195 348 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 MRPS36P4-201ENST00000534436 298 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 HSPE1P20-201ENST00000538133 289 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS50Q96JG6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS50Q96JG6 MIR5696-201ENST00000578474 85 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 AC023043.3-201ENST00000593113 385 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 VN1R107P-201ENST00000601784 209 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 AC009318.2-201ENST00000610917 651 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS50Q96JG6 AC004944.1-201ENST00000517807 3059 ntBASIC2.99□□□□□ -1.93
VPS50Q96JG6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS50Q96JG6 Y_RNA.28-201ENST00000362554 111 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNA5SP374-201ENST00000362939 125 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNU6-490P-201ENST00000362985 107 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNY1P16-201ENST00000363063 111 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 Y_RNA.148-201ENST00000363557 117 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNU6-99P-201ENST00000364721 107 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 SNORD32A-201ENST00000364805 84 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 SNORA7.4-201ENST00000384249 137 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNU6-19P-201ENST00000384718 107 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 PTGES3P4-201ENST00000426243 356 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 SNRPGP7-201ENST00000469016 106 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 AC097462.2-201ENST00000504623 481 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 AC105758.1-201ENST00000506038 399 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RNA5SP341-201ENST00000516261 117 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 RN7SKP295-201ENST00000517264 153 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms