Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC018692.3-201ENST00000623929 123 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 AL078596.1-201ENST00000624856 447 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
CTHRC1Q96CG8 MTND5P16-201ENST00000460269 1703 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 SNORD32A-201ENST00000364805 84 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 SNORA12.2-201ENST00000391040 156 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RNU6-101P-201ENST00000410323 104 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RPL23AP95-201ENST00000426806 265 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AL353752.1-201ENST00000454946 260 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 snoU13.30-201ENST00000458951 104 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RN7SL863P-201ENST00000462370 296 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RPL30P12-201ENST00000474666 353 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 GZMAP1-201ENST00000503054 631 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 MRPS36P4-201ENST00000534436 298 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AL355877.2-201ENST00000603670 358 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CTHRC1Q96CG8 AC002543.1-201ENST00000299783 1954 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC091812.1-201ENST00000432235 1948 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RNU4-42P-201ENST00000364738 142 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 DYNLT3P1-201ENST00000378574 347 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.405-201ENST00000383979 100 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.451-201ENST00000384200 100 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RNU6-622P-201ENST00000384272 103 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.485-201ENST00000384395 102 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.504-201ENST00000384481 104 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.524-201ENST00000384564 100 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.527-201ENST00000384573 102 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.561-201ENST00000384694 100 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 SAR1AP2-201ENST00000392696 594 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 MIR190B-201ENST00000401119 79 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC138623.1-201ENST00000418060 216 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC244670.1-201ENST00000436879 112 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 GPM6BP3-201ENST00000442797 145 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RNU7-169P-201ENST00000459456 61 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 RPL23AP75-201ENST00000491601 451 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 SNORA40.14-201ENST00000516543 86 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC115990.1-201ENST00000526957 301 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC090897.2-201ENST00000581715 130 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 VN1R91P-201ENST00000594377 169 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AL391813.1-201ENST00000603098 260 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AL132822.1-201ENST00000617063 513 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC137590.2-201ENST00000619709 240 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 MIR4272-201ENST00000635924 64 ntBASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.92□□□□□ -1.94
CTHRC1Q96CG8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 RNA5SP139-201ENST00000364340 117 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 SNORD14.1-201ENST00000365609 90 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.455-201ENST00000384230 98 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 Y_RNA.526-201ENST00000384572 110 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 MIR483-201ENST00000385070 76 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 RN7SKP61-201ENST00000410642 295 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 MTCO3P19-201ENST00000415864 321 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC091874.1-201ENST00000511402 339 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 RN7SKP272-201ENST00000516988 232 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC006600.1-201ENST00000572529 153 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 RPL23AP78-201ENST00000599928 470 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 SNORD58B-201ENST00000607313 66 ntBASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CTHRC1Q96CG8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CTHRC1Q96CG8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CTHRC1Q96CG8 GABRG2-229ENST00000641017 3628 ntBASIC2.9□□□□□ -1.94
CTHRC1Q96CG8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.9□□□□□ -1.95
CTHRC1Q96CG8 AC092268.1-201ENST00000342691 405 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms