Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTCYBP2-201ENST00000407745 171 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 MIR1294-201ENST00000408503 142 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC132942.1-201ENST00000486753 483 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC145146.1-201ENST00000496370 254 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 SLC25A15P5-201ENST00000508033 253 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 RNU6-567P-201ENST00000516746 107 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AP000889.2-201ENST00000532684 490 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AL157687.1-201ENST00000554853 619 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 MIR5692C1-201ENST00000585309 91 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AL357078.3-201ENST00000607528 618 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 DISC2.1-201ENST00000612827 205 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 OR4G1P-203ENST00000641984 1631 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 RNU6-780P-201ENST00000391030 104 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 SNORA46.1-201ENST00000391069 153 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AL359672.1-201ENST00000442302 409 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC008628.2-201ENST00000502605 298 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 SNORA31.16-201ENST00000516773 139 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 EIF4BP1-201ENST00000554881 351 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC021231.3-201ENST00000558497 370 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AP000654.2-201ENST00000605633 586 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC006386.2-201ENST00000624491 75 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 AC012005.1-201ENST00000624575 75 ntBASIC2.22□□□□□ -2.05
VPS33AQ96AX1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS33AQ96AX1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-522P-201ENST00000364497 107 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.333-201ENST00000365274 102 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-483P-201ENST00000384088 108 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 SNORD14D-201ENST00000384390 87 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 MIR181A1-201ENST00000385026 110 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AL445529.1-201ENST00000398713 389 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-908P-201ENST00000410160 94 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNA5SP201-201ENST00000410316 124 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AL109933.2-201ENST00000452651 260 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC025423.5-201ENST00000550230 219 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 MIR3923-201ENST00000579521 83 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 RNU6-89P-201ENST00000606519 100 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC004492.1-201ENST00000607036 742 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AL121757.2-201ENST00000611223 313 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC135507.2-201ENST00000612443 309 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 MIR1321-201ENST00000637766 79 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
VPS33AQ96AX1 MTND4P23-201ENST00000447723 1363 ntBASIC2.21□□□□□ -2.06
VPS33AQ96AX1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 SNORA80A-201ENST00000363922 136 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 MIR196B-201ENST00000384852 84 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 MIR1262-201ENST00000408276 93 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS33AQ96AX1 U8.21-201ENST00000459536 136 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 ANXA2P1-201ENST00000505539 926 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 RNA5SP356-201ENST00000515972 94 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 RNU6-612P-201ENST00000516909 102 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC021269.2-201ENST00000532318 330 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AK6P1-201ENST00000540219 478 ntBASIC2.2□□□□□ -2.06
VPS33AQ96AX1 AC016256.1-201ENST00000547971 354 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms