Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
BRF1Q92994 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.87□□□□□ -1.79
BRF1Q92994 FTH1P9-201ENST00000513251 355 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AC104027.1-201ENST00000521887 300 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.87□□□□□ -1.79
BRF1Q92994 MIR3186-201ENST00000577404 85 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AL451007.1-201ENST00000595491 289 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BRF1Q92994 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
BRF1Q92994 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
BRF1Q92994 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BRF1Q92994 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BRF1Q92994 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.86□□□□□ -1.79
BRF1Q92994 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BRF1Q92994 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNA5SP119-201ENST00000362715 117 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNU6-142P-201ENST00000384019 107 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNU4-70P-201ENST00000384579 139 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
BRF1Q92994 RNA5SP213-201ENST00000391031 106 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNU1-139P-201ENST00000391307 165 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 FTH1P15-201ENST00000406984 280 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 EIF1P2-201ENST00000428233 350 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.86□□□□□ -1.79
BRF1Q92994 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
BRF1Q92994 HMGN2P10-201ENST00000448085 265 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 AC091874.1-201ENST00000511402 339 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 RNU6-111P-201ENST00000517179 105 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.86□□□□□ -1.79
BRF1Q92994 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.86□□□□□ -1.79
BRF1Q92994 MIR3609-201ENST00000582661 80 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 AC073410.2-201ENST00000603240 332 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 AC019159.1-201ENST00000605094 187 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 SNORA43.4-201ENST00000629559 138 ntBASIC3.86□□□□□ -1.79
BRF1Q92994 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.86□□□□□ -1.79
BRF1Q92994 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
BRF1Q92994 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
BRF1Q92994 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.86□□□□□ -1.79
BRF1Q92994 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.86□□□□□ -1.79
BRF1Q92994 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.85□□□□□ -1.79
BRF1Q92994 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
BRF1Q92994 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRF1Q92994 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRF1Q92994 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.85□□□□□ -1.79
BRF1Q92994 AL391987.6-201ENST00000305671 199 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 SNORD56.1-201ENST00000362913 68 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RNU5B-2P-201ENST00000363036 113 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 Y_RNA.143-201ENST00000363520 106 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 Y_RNA.237-201ENST00000364439 102 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 SNORA29-201ENST00000384183 140 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 MIR449B-201ENST00000384995 97 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 SNORD58.1-201ENST00000391313 66 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AL079342.1-201ENST00000401460 267 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.85□□□□□ -1.79
BRF1Q92994 AC099548.1-201ENST00000421443 426 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 BPY2DP-201ENST00000422208 265 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AL590135.1-201ENST00000422215 156 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 CST9LP2-201ENST00000437612 320 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC016700.2-201ENST00000446011 156 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 CYCSP35-201ENST00000451978 304 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.85□□□□□ -1.79
BRF1Q92994 AL136097.1-201ENST00000456945 913 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RPL26P9-201ENST00000457466 433 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RNA5SP310-201ENST00000459084 116 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RPL21P10-201ENST00000463521 490 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC087477.1-201ENST00000465747 340 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RNU1-143P-201ENST00000516296 146 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RNU6-928P-201ENST00000516876 104 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC022868.1-201ENST00000517767 391 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
BRF1Q92994 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.85□□□□□ -1.79
BRF1Q92994 MIR5571-201ENST00000577998 113 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 MIR4659A-201ENST00000580269 81 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 U1.23-201ENST00000610293 146 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 RNU1-68P-201ENST00000615382 146 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC137590.2-201ENST00000619709 240 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 U1.39-201ENST00000621562 146 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
BRF1Q92994 HAUS6P2-201ENST00000433254 2404 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 AC110491.1-201ENST00000562191 2010 ntBASIC3.85□□□□□ -1.79
BRF1Q92994 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BRF1Q92994 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRF1Q92994 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRF1Q92994 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.84□□□□□ -1.79
BRF1Q92994 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRF1Q92994 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.84□□□□□ -1.79
BRF1Q92994 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
BRF1Q92994 RNU6-222P-201ENST00000362438 107 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 RNU6-137P-201ENST00000363680 108 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 MIR183-201ENST00000384958 110 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 MIR32-201ENST00000384965 70 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 Y_RNA.581-201ENST00000391017 97 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 RPS4XP3-201ENST00000398541 413 ntBASIC3.84□□□□□ -1.79
BRF1Q92994 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.84□□□□□ -1.79
BRF1Q92994 AL591034.1-201ENST00000407447 340 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms