Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.6□□□□□ -1.83
ERCC4Q92889 AL513124.1-201ENST00000450410 614 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 RPL7P49-201ENST00000471402 708 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.6□□□□□ -1.83
ERCC4Q92889 Y_RNA.668-201ENST00000516233 93 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 AC009812.2-201ENST00000517657 457 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.6□□□□□ -1.83
ERCC4Q92889 NACAP3-201ENST00000552100 481 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 MIR2682-201ENST00000580305 110 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 MIR3609-201ENST00000582661 80 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 AC007792.1-201ENST00000623023 402 ntBASIC3.6□□□□□ -1.83
ERCC4Q92889 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERCC4Q92889 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERCC4Q92889 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ERCC4Q92889 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.6□□□□□ -1.83
ERCC4Q92889 AC008264.2-201ENST00000610193 3731 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.59□□□□□ -1.83
ERCC4Q92889 SNORD46.1-201ENST00000364139 104 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 RNA5SP72-201ENST00000364442 117 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 SNORD32A-201ENST00000364805 84 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 U8.9-201ENST00000365667 134 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 Y_RNA.526-201ENST00000384572 110 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 BTF3L4P2-201ENST00000392798 346 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 MIR190B-201ENST00000401119 79 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 BMS1P22-201ENST00000414726 313 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.59□□□□□ -1.83
ERCC4Q92889 AC104332.2-201ENST00000429959 156 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 MTCO3P29-201ENST00000432119 779 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AC244505.4-201ENST00000434905 287 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AC007969.2-201ENST00000441891 191 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.59□□□□□ -1.83
ERCC4Q92889 SSXP5-201ENST00000443473 287 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AC124916.1-201ENST00000444020 547 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AL031659.1-201ENST00000447075 539 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.59□□□□□ -1.83
ERCC4Q92889 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 RNU7-169P-201ENST00000459456 61 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 RN7SL75P-201ENST00000461926 281 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.59□□□□□ -1.83
ERCC4Q92889 MIR7975-201ENST00000619350 68 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ERCC4Q92889 AC110491.1-201ENST00000562191 2010 ntBASIC3.59□□□□□ -1.83
ERCC4Q92889 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ERCC4Q92889 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
ERCC4Q92889 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ERCC4Q92889 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ERCC4Q92889 AC093831.2-201ENST00000624393 3427 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AP000560.1-201ENST00000624150 1937 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ERCC4Q92889 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ERCC4Q92889 RNU6-527P-201ENST00000363425 104 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 Y_RNA.210-201ENST00000364161 110 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 SNORD116-20-201ENST00000384529 92 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 MIR34B-201ENST00000385076 84 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 FTH1P15-201ENST00000406984 280 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 Y_RNA.618-201ENST00000410949 107 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 MTCO3P19-201ENST00000415864 321 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AC074117.2-201ENST00000417130 397 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.58□□□□□ -1.84
ERCC4Q92889 AL358453.1-201ENST00000422522 250 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 RPL23AP95-201ENST00000426806 265 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 OSTCP8-201ENST00000445117 448 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 MTCO3P8-201ENST00000453691 755 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.58□□□□□ -1.84
ERCC4Q92889 RPL26P9-201ENST00000457466 433 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 RPL23AP49-201ENST00000492925 468 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AC097462.2-201ENST00000504623 481 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AC110588.1-201ENST00000559699 137 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.58□□□□□ -1.84
ERCC4Q92889 AC020895.1-201ENST00000595362 272 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AL159153.1-201ENST00000619688 317 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AC097372.5-201ENST00000623665 376 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 AC243829.7-201ENST00000633081 225 ntBASIC3.58□□□□□ -1.84
ERCC4Q92889 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ERCC4Q92889 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.58□□□□□ -1.84
ERCC4Q92889 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 RNU6-238P-201ENST00000363313 106 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 Y_RNA.214-201ENST00000364201 112 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 AL591043.1-201ENST00000432461 424 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 RPS3AP12-201ENST00000443616 753 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.57□□□□□ -1.84
ERCC4Q92889 OR2AQ1P-201ENST00000451972 200 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.57□□□□□ -1.84
ERCC4Q92889 snoU13.22-201ENST00000459428 104 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 MRPL42P6-201ENST00000486397 371 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 AC074250.1-201ENST00000511117 192 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.57□□□□□ -1.84
ERCC4Q92889 AC021739.1-201ENST00000559631 174 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.57□□□□□ -1.84
ERCC4Q92889 RAC1P9-201ENST00000604990 392 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 AL356157.2-201ENST00000605122 111 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 MTND4LP5-201ENST00000605152 292 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 332.8 ms