Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC069528.2-201ENST00000624849 1991 ntBASIC1.87□□□□□ -2.11
LINC01006Q8NI28 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-562P-201ENST00000362731 107 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-527P-201ENST00000363425 104 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 SNORD56.5-201ENST00000364281 72 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 SET-203ENST00000372688 801 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 SNORD116-11-201ENST00000383882 92 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-1083P-201ENST00000384022 107 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-214P-201ENST00000384130 107 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-692P-201ENST00000384496 107 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-748P-201ENST00000384648 107 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 MIR548F5-201ENST00000408421 86 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNU6-1328P-201ENST00000410938 106 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNA5SP492-201ENST00000411330 114 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC092427.1-202ENST00000430569 476 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 MTND4LP16-201ENST00000440828 295 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC096638.1-201ENST00000444678 216 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 MTND1P11-201ENST00000456661 876 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC130509.1-201ENST00000464158 433 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RPL23AP70-201ENST00000483361 460 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC046134.1-201ENST00000514454 666 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 RNA5SP454-201ENST00000517231 127 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 COX6CP5-201ENST00000527162 228 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 MIR4769-201ENST00000584126 77 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC091135.1-201ENST00000585943 307 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.804-201ENST00000615262 101 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 uc_338.15-201ENST00000615470 191 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC104260.1-201ENST00000616660 539 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC01006Q8NI28 AC010329.5-201ENST00000623497 2174 ntBASIC1.86□□□□□ -2.11
LINC01006Q8NI28 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.166-201ENST00000363730 102 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-461P-201ENST00000364195 107 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU5E-4P-201ENST00000364931 120 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-867P-201ENST00000364956 107 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-128P-201ENST00000383976 107 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-843P-201ENST00000384454 104 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-306P-201ENST00000384617 107 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 SNORA41-201ENST00000384675 132 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU2-25P-201ENST00000411041 191 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-325P-201ENST00000411132 105 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-293P-201ENST00000411259 106 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC074117.2-201ENST00000417130 397 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 Z98742.2-201ENST00000431564 187 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AL365400.1-201ENST00000431854 640 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 HMGB1P18-201ENST00000438801 619 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RPS12P2-201ENST00000439728 269 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MTND1P17-201ENST00000448961 204 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC008571.1-201ENST00000467232 300 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC096745.1-201ENST00000509945 370 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RNU6-566P-201ENST00000516790 107 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 RN7SKP40-201ENST00000517211 242 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC109479.2-201ENST00000517842 174 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 HSPE1P20-201ENST00000538133 289 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MIR4790-201ENST00000577799 79 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC100830.2-201ENST00000581636 240 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MIR3616-201ENST00000584070 92 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 uc_338.5-201ENST00000611839 155 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC244517.12-201ENST00000623581 663 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 TPTEP1-208ENST00000636884 213 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 AC241585.2-209ENST00000638217 143 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MTND5P6-201ENST00000422338 1798 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 MTND4P12-201ENST00000498999 1377 ntBASIC1.85□□□□□ -2.11
LINC01006Q8NI28 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC01006Q8NI28 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LINC01006Q8NI28 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.84□□□□□ -2.11
LINC01006Q8NI28 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LINC01006Q8NI28 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.142-201ENST00000363491 102 ntBASIC1.84□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.151-201ENST00000363566 112 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms