Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC079140.2-201ENST00000506193 142 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RBBP4P6-201ENST00000508098 202 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AP003181.2-201ENST00000528941 181 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 U4.7-201ENST00000638126 106 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 LINC02555-201ENST00000563933 1951 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RNU4-15P-201ENST00000362613 141 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 MTCO2P8-201ENST00000412213 658 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 RPS27P16-201ENST00000425758 201 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 CST2P1-201ENST00000425770 87 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AC004854.1-201ENST00000440356 349 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 MTND1P30-201ENST00000441241 901 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AC130509.1-201ENST00000464158 433 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AL049829.1-201ENST00000465411 156 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 RAB11AP2-201ENST00000545905 639 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 PCMTD1P2-201ENST00000565017 355 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AC012414.6-201ENST00000568241 401 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 Z69720.2-201ENST00000624755 279 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 AC010608.3-201ENST00000625048 527 ntBASIC1.18□□□□□ -2.22
CLHC1Q8NHS4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MIR302D-201ENST00000362275 68 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 RNY1P10-201ENST00000363268 113 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 RNU6-501P-201ENST00000364072 100 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 RNU6-296P-201ENST00000384608 107 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 CYCSP33-201ENST00000414485 327 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC007283.2-201ENST00000424739 197 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AL589872.1-201ENST00000426602 288 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 CALM2P2-201ENST00000428512 440 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AL591043.1-201ENST00000432461 424 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MTCYBP39-201ENST00000437562 491 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 HMGN2P18-201ENST00000450680 270 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 SNRPFP4-201ENST00000456366 242 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MTATP6P9-201ENST00000515039 680 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MTND1P8-201ENST00000571424 950 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC073539.2-201ENST00000597113 165 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC006927.3-201ENST00000638789 384 ntBASIC1.17□□□□□ -2.22
CLHC1Q8NHS4 AC245060.5-201ENST00000610778 3293 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 MIR340-201ENST00000362125 95 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 RNU5F-6P-201ENST00000362979 116 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 MIR513B-201ENST00000385136 84 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC123900.1-201ENST00000420390 96 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AL365184.2-201ENST00000431139 435 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 FTH1P12-201ENST00000432137 551 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 RPL36AP21-201ENST00000490372 323 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC034244.1-201ENST00000507687 207 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 MTND3P25-201ENST00000509243 135 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 SNORA3.4-201ENST00000515969 96 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 RNA5SP490-201ENST00000517141 136 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AP002453.2-201ENST00000533503 320 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC008752.3-201ENST00000588113 712 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 AC105129.3-201ENST00000605455 485 ntBASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
CLHC1Q8NHS4 RNU6-500P-201ENST00000362349 107 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 RNU6-105P-201ENST00000363909 104 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 RNU6-142P-201ENST00000384019 107 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 MIR544A-201ENST00000384855 91 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 MRPL42P2-201ENST00000403169 426 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AL008987.1-201ENST00000415528 237 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 C8orf59P1-201ENST00000429930 303 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC090115.3-201ENST00000553218 849 ntBASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.15□□□□□ -2.23
CLHC1Q8NHS4 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms