Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AL138889.2-201ENST00000603883 242 ntBASIC0.47□□□□□ -2.33
NUP35Q8NFH5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.47□□□□□ -2.33
NUP35Q8NFH5 MIR6767-201ENST00000637302 66 ntBASIC0.47□□□□□ -2.33
NUP35Q8NFH5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
NUP35Q8NFH5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
NUP35Q8NFH5 ELOCP17-201ENST00000414751 326 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.46□□□□□ -2.34
NUP35Q8NFH5 MTND1P18-201ENST00000448191 573 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 NDUFB1P2-201ENST00000449477 176 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC034244.1-201ENST00000507687 207 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC112206.3-201ENST00000514578 389 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 RNA5SP102-201ENST00000516865 106 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AP003355.1-201ENST00000518956 587 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AL442163.3-201ENST00000554110 156 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC008015.1-201ENST00000555505 465 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AL022154.1-201ENST00000604698 785 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 BNIP3P10-201ENST00000605360 577 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC105129.3-201ENST00000605455 485 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.46□□□□□ -2.34
NUP35Q8NFH5 U6.42-201ENST00000618440 107 ntBASIC0.46□□□□□ -2.34
NUP35Q8NFH5 AC023934.1-201ENST00000574529 2389 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 RNA5SP361-201ENST00000362686 118 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 RNU4-79P-201ENST00000362764 141 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 Y_RNA.124-201ENST00000363339 93 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 SNORA32.2-201ENST00000384049 122 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 MTND3P20-201ENST00000407663 186 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 RNU4-22P-201ENST00000411058 166 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.45□□□□□ -2.34
NUP35Q8NFH5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.45□□□□□ -2.34
NUP35Q8NFH5 GTF2IP13-201ENST00000438487 386 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 ATP5EP1-201ENST00000510257 156 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AC027338.1-201ENST00000514840 825 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 Y_RNA.689-201ENST00000516589 107 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 SNORA59B-202ENST00000578183 701 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.45□□□□□ -2.34
NUP35Q8NFH5 VN1R82P-201ENST00000601481 356 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AL034555.1-201ENST00000604816 211 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 MIR6835-201ENST00000621552 64 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 AC018630.2-201ENST00000534866 2403 ntBASIC0.45□□□□□ -2.34
NUP35Q8NFH5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 MIR337-201ENST00000362281 93 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 MIR96-201ENST00000362288 78 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 RNU4-12P-201ENST00000365233 139 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 SNORA4.2-201ENST00000365313 147 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 MIR200A-201ENST00000384875 90 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 RN7SKP266-201ENST00000410232 287 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AL591043.1-201ENST00000432461 424 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC115990.1-201ENST00000526957 301 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AL121579.1-201ENST00000555129 305 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC109446.2-201ENST00000567872 497 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC018889.1-201ENST00000605372 397 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC012467.1-201ENST00000607740 256 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 AC245297.2-201ENST00000610119 565 ntBASIC0.44□□□□□ -2.34
NUP35Q8NFH5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.44□□□□□ -2.34
NUP35Q8NFH5 RNU4-15P-201ENST00000362613 141 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RNU6-946P-201ENST00000383878 107 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RNU6-224P-201ENST00000384055 107 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 MIR544A-201ENST00000384855 91 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RNA5SP111-201ENST00000411386 101 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RPS3AP37-201ENST00000419176 745 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 USP9YP14-201ENST00000430663 563 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AC002429.1-201ENST00000437672 148 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 MTATP6P25-201ENST00000574491 261 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AL590095.2-201ENST00000604136 117 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 AC084824.5-201ENST00000612009 413 ntBASIC0.43□□□□□ -2.34
NUP35Q8NFH5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
NUP35Q8NFH5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
NUP35Q8NFH5 RNU6-1123P-201ENST00000362347 106 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 RNU1-93P-201ENST00000364704 169 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 SNORD12-201ENST00000391002 90 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP35Q8NFH5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP35Q8NFH5 CETN4P-201ENST00000432407 469 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.42□□□□□ -2.34
NUP35Q8NFH5 MTCYBP1-201ENST00000454315 1119 ntBASIC0.42□□□□□ -2.34
NUP35Q8NFH5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP35Q8NFH5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms