Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC022441.3-201ENST00000605737 136 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AL359198.2-201ENST00000611836 194 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC010999.1-201ENST00000611856 324 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC073349.3-201ENST00000617616 186 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC048347.1-201ENST00000624621 427 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NUP43Q8NFH3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.59□□□□□ -1.84
NUP43Q8NFH3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NUP43Q8NFH3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.59□□□□□ -1.84
NUP43Q8NFH3 AP001486.2-201ENST00000561652 5113 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 Y_RNA.217-201ENST00000364214 105 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 RNU6-923P-201ENST00000364753 107 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 Y_RNA.291-201ENST00000364886 113 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 RPL23AP36-201ENST00000413895 458 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC112220.1-201ENST00000434628 355 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 Y_RNA.641-201ENST00000459414 105 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC091021.1-201ENST00000468051 388 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 RNU6-346P-201ENST00000516288 111 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 RNA5SP143-201ENST00000516936 115 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MTND5P41-201ENST00000517498 206 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MRPS18CP4-201ENST00000535821 231 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC233702.2-202ENST00000562547 291 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MIR4444-1-201ENST00000581696 74 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MIR4444-2-201ENST00000584390 74 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AL606490.9-201ENST00000603331 271 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC024220.1-201ENST00000603675 484 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AL137849.1-201ENST00000604767 169 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 MIR3529-201ENST00000637713 78 ntBASIC3.58□□□□□ -1.84
NUP43Q8NFH3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP43Q8NFH3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RNA5SP283-201ENST00000365604 119 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 Y_RNA.435-201ENST00000384095 112 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RNU6-622P-201ENST00000384272 103 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RNU6-804P-201ENST00000384286 107 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MIR554-201ENST00000384874 96 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 HMGN2P8-201ENST00000391458 268 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RNU6-394P-201ENST00000410735 107 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 BPY2DP-201ENST00000422208 265 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 AC012306.1-201ENST00000423267 114 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RPL26P9-201ENST00000457466 433 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 RNA5SP54-201ENST00000516951 92 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 NACAP3-201ENST00000552100 481 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 AC021739.1-201ENST00000559631 174 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MIR4308-201ENST00000580634 81 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MIR3944-201ENST00000581277 108 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 AC090897.2-201ENST00000581715 130 ntBASIC3.57□□□□□ -1.84
NUP43Q8NFH3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP43Q8NFH3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 ADAM3A-203ENST00000461344 2157 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 MTATP6P29-201ENST00000415057 132 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AC099548.1-201ENST00000421443 426 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 RPL39P29-201ENST00000447779 157 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AL358232.1-201ENST00000448030 501 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AC005042.3-201ENST00000453230 174 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 RAC1P2-201ENST00000511164 579 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 RNU6-1219P-201ENST00000516143 112 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 SNORA31.16-201ENST00000516773 139 ntBASIC3.56□□□□□ -1.84
NUP43Q8NFH3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.56□□□□□ -1.84
NUP43Q8NFH3 MIR3144-201ENST00000579460 79 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms