Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC027575.1-201ENST00000481064 460 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 HSPE1P4-201ENST00000550617 308 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 MIR3935-201ENST00000583472 104 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AL356157.2-201ENST00000605122 111 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MRPL55Q7Z7F7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-903P-201ENST00000391270 109 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 RNU2-9P-201ENST00000410194 145 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AL031274.1-201ENST00000450334 232 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 MTND3P7-201ENST00000474435 343 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AL049873.1-201ENST00000480540 376 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC005741.1-201ENST00000511094 432 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC010486.1-201ENST00000511793 424 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 Y_RNA.717-201ENST00000517106 92 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 HSPE1P18-201ENST00000517602 280 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC109446.1-201ENST00000566172 220 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 MIR5583-1-201ENST00000580941 59 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 MIR5002-201ENST00000584713 97 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 RSL24D1P11-201ENST00000591045 491 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 AC091304.6-201ENST00000619761 202 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 SNORA43.4-201ENST00000629559 138 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
MRPL55Q7Z7F7 MTND5P6-201ENST00000422338 1798 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 Y_RNA.159-201ENST00000363674 87 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 Y_RNA.169-201ENST00000363745 96 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 RNA5SP160-201ENST00000364866 120 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-296P-201ENST00000384608 107 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 RNU2-29P-201ENST00000410423 189 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 POLHP1-201ENST00000411806 470 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 SNRPEP8-201ENST00000442866 260 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 RPL23AP63-201ENST00000498752 471 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC021146.2-201ENST00000504736 556 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC010486.2-201ENST00000505572 483 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 SUB1P2-201ENST00000556401 297 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 MIR3923-201ENST00000579521 83 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC091931.1-201ENST00000623488 728 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 SCARNA15.3-201ENST00000626315 122 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 SCARNA4.1-201ENST00000628597 123 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC068205.3-201ENST00000636385 468 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 AC131280.1-202ENST00000624067 4211 ntBASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.3□□□□□ -2.2
MRPL55Q7Z7F7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC092268.1-201ENST00000342691 405 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-552P-201ENST00000362869 119 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 SNORA36A-201ENST00000384221 132 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 MTCO3P41-201ENST00000414801 328 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 NCOR1P3-201ENST00000420479 303 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AL358934.1-201ENST00000432346 324 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 CETN4P-201ENST00000432407 469 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AL356010.1-201ENST00000456364 102 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 RNU7-167P-201ENST00000459160 62 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 TOMM22P6-201ENST00000465035 409 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC114801.2-201ENST00000503825 781 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AK3P2-201ENST00000507976 429 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 SNORA44.1-201ENST00000517031 108 ntBASIC1.29□□□□□ -2.2
MRPL55Q7Z7F7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms