Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LYSMD3Q7Z3D4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AL133243.3-201ENST00000617415 3004 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 U3.9-201ENST00000363823 204 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 SNORD87-201ENST00000364849 89 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP22-201ENST00000365393 109 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.584-201ENST00000391090 114 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AL512604.1-201ENST00000404812 257 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AL591034.1-201ENST00000407447 340 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 MIR1911-201ENST00000410783 80 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP104-201ENST00000410989 118 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 RPS29P17-201ENST00000430795 166 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC109327.1-201ENST00000471666 403 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-1282P-201ENST00000516735 96 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 AL023881.1-201ENST00000621088 301 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 SNORD98-201ENST00000636377 67 ntBASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD3Q7Z3D4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 MIR367-201ENST00000362299 68 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 RNU1-64P-201ENST00000365443 163 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-622P-201ENST00000384272 103 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 SNORA11F-201ENST00000408237 128 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 RNU4-43P-201ENST00000410628 137 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC025445.1-201ENST00000502728 300 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC090142.3-201ENST00000519012 385 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 TRAV8-5-201ENST00000537369 341 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AL670379.3-201ENST00000605040 251 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AL138721.1-201ENST00000616756 179 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC011944.2-201ENST00000624440 683 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AC087190.4-201ENST00000574616 8334 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 AL356489.2-201ENST00000566968 3528 ntBASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LYSMD3Q7Z3D4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 SNORD74.4-201ENST00000364129 80 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 RNA5SP175-201ENST00000364275 119 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 U8.7-201ENST00000364940 136 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-144P-201ENST00000383951 107 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 SNORA11-201ENST00000408789 128 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 RNU6-383P-201ENST00000410864 94 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 Y_RNA.630-201ENST00000411370 108 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC099548.1-201ENST00000421443 426 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC004975.1-201ENST00000428733 208 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 MTCO1P44-201ENST00000441935 243 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 RN7SL303P-201ENST00000469773 251 ntBASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LYSMD3Q7Z3D4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.34□□□□□ -1.72
LYSMD3Q7Z3D4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.34□□□□□ -1.72
LYSMD3Q7Z3D4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.34□□□□□ -1.72
LYSMD3Q7Z3D4 NOL8P1-201ENST00000508336 3529 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms