Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC090617.10-201ENST00000624308 134 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC099654.14-201ENST00000638599 341 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC010889.1-201ENST00000566193 2666 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.72-201ENST00000362894 103 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 SNORA46.1-201ENST00000391069 153 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 RNU6-1148P-201ENST00000410992 104 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 NDUFA5P4-201ENST00000436704 385 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AL161651.1-201ENST00000440882 223 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC096638.1-201ENST00000444678 216 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC013470.1-201ENST00000453438 462 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC117503.1-201ENST00000472241 394 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 TRBVA-201ENST00000498804 316 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC116353.2-201ENST00000505332 712 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC116655.1-201ENST00000508324 901 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.687-201ENST00000516558 91 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 RNU6-1314P-201ENST00000517139 104 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 MIR5692C1-201ENST00000585309 91 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZNF544Q6NX49 HAUS6P2-201ENST00000433254 2404 ntBASIC1.96□□□□□ -2.1
ZNF544Q6NX49 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 ADAM3A-203ENST00000461344 2157 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.88-201ENST00000363029 99 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.279-201ENST00000364763 95 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 RNU6-748P-201ENST00000384648 107 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC009161.1-201ENST00000417306 376 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL513185.2-201ENST00000425543 193 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MTCO3P46-201ENST00000425787 232 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC092001.1-201ENST00000453012 261 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC006026.2-201ENST00000457376 180 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 RNU7-138P-201ENST00000459479 64 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC007547.1-201ENST00000462177 490 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 UBL5P3-201ENST00000475112 231 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MTCO2P30-201ENST00000503662 364 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MTCYBP40-201ENST00000509390 1135 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 SNORA19.2-201ENST00000516013 114 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 CR383656.8-201ENST00000549046 145 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL121821.2-201ENST00000556081 394 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC007151.1-201ENST00000572774 483 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC005261.5-201ENST00000596280 355 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL355877.2-201ENST00000603670 358 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 BNIP3P10-201ENST00000605360 577 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AC123912.5-201ENST00000605470 343 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.95□□□□□ -2.1
ZNF544Q6NX49 MIR6715A-201ENST00000615929 79 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 AL136221.1-201ENST00000621449 509 ntBASIC1.95□□□□□ -2.1
ZNF544Q6NX49 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 SNORD113-7-201ENST00000363762 77 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.212-201ENST00000364177 102 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 RNU6-487P-201ENST00000365430 104 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.390-201ENST00000383932 102 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 Y_RNA.414-201ENST00000384011 101 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 MT-TL1-201ENST00000386347 75 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL356776.1-201ENST00000406574 447 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 FTH1P15-201ENST00000406984 280 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 SNORD56-201ENST00000413522 71 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL117339.3-201ENST00000418733 162 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 PGBD4P6-201ENST00000421501 610 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 OSTCP8-201ENST00000445117 448 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AC083904.1-201ENST00000487828 231 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF544Q6NX49 RNU6-581P-201ENST00000516214 105 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 SNORA43.2-201ENST00000516652 128 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 SNORA20.3-201ENST00000516880 132 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
ZNF544Q6NX49 HSPE1P18-201ENST00000517602 280 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms