Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MTND3P9-201ENST00000429526 346 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC38Q502W7 MTND1P17-201ENST00000448961 204 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC38Q502W7 CKS1BP2-201ENST00000497342 240 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AP005639.2-201ENST00000527592 928 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC022080.3-201ENST00000544433 482 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC38Q502W7 AL670379.2-201ENST00000604983 252 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AL138963.2-201ENST00000605137 226 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 MIR8076-201ENST00000611401 83 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC008121.3-201ENST00000618726 433 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC38Q502W7 ZNF271P-202ENST00000465539 1970 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC009541.1-201ENST00000438279 2662 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC092593.1-201ENST00000515413 1815 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC38Q502W7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC38Q502W7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC000403.1-201ENST00000613696 3585 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 RNA5SP125-201ENST00000364843 120 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 RNU6-790P-201ENST00000384479 105 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC098614.3-201ENST00000438957 440 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AL161788.1-201ENST00000441805 169 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC090096.1-201ENST00000489168 390 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 HMGB1P35-201ENST00000503360 598 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC091874.1-201ENST00000511402 339 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 Y_RNA.682-201ENST00000516457 100 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 RNU7-30P-201ENST00000516835 62 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AP000889.1-201ENST00000530968 660 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 MIR4790-201ENST00000577799 79 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 AC078795.3-201ENST00000602913 472 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC38Q502W7 AL133216.2-202ENST00000634512 349 ntBASIC2.87□□□□□ -1.95
CCDC38Q502W7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC38Q502W7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC38Q502W7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC38Q502W7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC38Q502W7 MIR6073-201ENST00000352083 89 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 RNU6-851P-201ENST00000384565 107 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 MIR521-1-201ENST00000384902 87 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 MIR517A-201ENST00000385001 87 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 MIR95-201ENST00000385072 81 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 UBA52P6-201ENST00000399822 382 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC236972.1-201ENST00000433225 199 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 DAP3P1-201ENST00000441522 278 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 RPS3P1-201ENST00000456781 192 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC104564.1-201ENST00000493028 407 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 PTP4A1P4-201ENST00000512479 322 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 RNU6-586P-201ENST00000517265 104 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC007375.1-201ENST00000554513 578 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC005668.1-201ENST00000571142 476 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AL049779.4-201ENST00000604500 156 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC124303.1-201ENST00000605703 360 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC019193.3-201ENST00000609144 554 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 AL161423.1-201ENST00000613700 262 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC006386.2-201ENST00000624491 75 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AC012005.1-201ENST00000624575 75 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 SNORD98-201ENST00000636377 67 ntBASIC2.86□□□□□ -1.95
CCDC38Q502W7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC38Q502W7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 Y_RNA.88-201ENST00000363029 99 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 RNU6-142P-201ENST00000384019 107 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 MIR29B2-201ENST00000385055 81 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 SNORA26.3-201ENST00000391119 136 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AL590135.1-201ENST00000422215 156 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC38Q502W7 COTL1P1-201ENST00000422309 375 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC019205.3-201ENST00000424573 156 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 CR769767.1-201ENST00000436337 346 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC016700.2-201ENST00000446011 156 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AL353752.1-201ENST00000454946 260 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 RNU7-26P-201ENST00000458980 63 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC015911.1-201ENST00000495111 156 ntBASIC2.85□□□□□ -1.95
CCDC38Q502W7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms