Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU4-28P-201ENST00000364739 141 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 RNU6-203P-201ENST00000384038 104 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 CYCSP33-201ENST00000414485 327 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 ART2BP-201ENST00000453501 499 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC130509.1-201ENST00000464158 433 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC005908.1-201ENST00000468701 347 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC010409.1-201ENST00000487382 476 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC145146.1-201ENST00000496370 254 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC104806.1-201ENST00000508720 308 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC074344.1-201ENST00000512823 224 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC005786.1-201ENST00000588553 154 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC104073.3-201ENST00000610942 955 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC091304.9-201ENST00000612091 226 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC016597.2-201ENST00000613256 341 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 MIR8074-201ENST00000615081 81 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZNF404Q494X3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZNF404Q494X3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 RNU4-15P-201ENST00000362613 141 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 SNORD115-7-201ENST00000365306 82 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 RNU6-45P-201ENST00000384471 107 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 OR6C66P-201ENST00000414917 930 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC104850.1-201ENST00000435940 476 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 UBE2D3P4-201ENST00000441973 436 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 TAF9P1-201ENST00000445421 515 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 TAF9P2-201ENST00000454958 515 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 RAP1BP2-201ENST00000478270 544 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC132942.1-201ENST00000486753 483 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC022447.4-201ENST00000504053 364 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC025465.3-201ENST00000510570 311 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 MTND3P5-201ENST00000512798 333 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 MRPS36P3-201ENST00000519284 130 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF404Q494X3 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 AL133173.2-201ENST00000614270 90 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 SNORD98-201ENST00000636377 67 ntBASIC1.17□□□□□ -2.22
ZNF404Q494X3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 RNU6-169P-201ENST00000365336 107 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF404Q494X3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 AL593851.1-201ENST00000426171 157 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 HMGN2P18-201ENST00000450680 270 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 SNRPGP7-201ENST00000469016 106 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC005741.1-201ENST00000511094 432 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 MTND2P32-201ENST00000521584 1038 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC087441.2-201ENST00000529141 262 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC087883.1-201ENST00000551882 391 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 SUB1P3-201ENST00000564581 315 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 SUB1P4-201ENST00000566062 339 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC245884.10-201ENST00000597355 337 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC123912.5-201ENST00000605470 343 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 snoU13.31-201ENST00000607291 104 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF404Q494X3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC004223.4-201ENST00000612426 332 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 AC120349.3-201ENST00000624377 529 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 U6.114-201ENST00000636407 96 ntBASIC1.16□□□□□ -2.22
ZNF404Q494X3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF404Q494X3 MTND5P17-201ENST00000418405 1603 ntBASIC1.15□□□□□ -2.22
ZNF404Q494X3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF404Q494X3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC243964.1-201ENST00000441814 261 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 MTND2P4-201ENST00000445034 1004 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF404Q494X3 RNU1-131P-201ENST00000458943 161 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC114801.2-201ENST00000503825 781 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 AC104136.1-201ENST00000512969 394 ntBASIC1.15□□□□□ -2.23
ZNF404Q494X3 Vault.3-201ENST00000516676 95 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms