Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL137100.2-201ENST00000555786 315 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.05□□□□□ -2.08
PTCH1Q13635 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.05□□□□□ -2.08
PTCH1Q13635 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.05□□□□□ -2.08
PTCH1Q13635 MIR3660-201ENST00000584845 100 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 RPL30P11-203ENST00000598995 310 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AL713866.2-201ENST00000603579 219 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AC090578.1-201ENST00000604955 591 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AL158032.1-201ENST00000605401 106 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AP002360.4-201ENST00000606980 481 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 RNU6-87P-201ENST00000607561 108 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AC068944.2-201ENST00000610373 403 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AP001506.1-201ENST00000615444 211 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AC099842.1-201ENST00000619919 596 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AL133216.2-202ENST00000634512 349 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AC099654.13-201ENST00000639774 207 ntBASIC2.05□□□□□ -2.08
PTCH1Q13635 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.04□□□□□ -2.08
PTCH1Q13635 Y_RNA.623-201ENST00000411128 95 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AL031779.1-201ENST00000415663 330 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 MTCO1P21-201ENST00000416634 589 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
PTCH1Q13635 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.04□□□□□ -2.08
PTCH1Q13635 MTND6P13-201ENST00000443510 523 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 GAPDHP17-201ENST00000449858 1001 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 MED28P2-201ENST00000475771 317 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 MTND2P33-201ENST00000506452 1031 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 RNA5SP337-201ENST00000517007 109 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.04□□□□□ -2.08
PTCH1Q13635 AP003392.2-201ENST00000527269 208 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 ADI1P3-201ENST00000549509 470 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC136619.2-201ENST00000563361 631 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC026271.5-201ENST00000577873 130 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC073410.2-201ENST00000603240 332 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC073648.5-201ENST00000603502 305 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC091805.2-201ENST00000603848 235 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC006566.1-201ENST00000608943 513 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC091895.1-201ENST00000624494 256 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
PTCH1Q13635 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PTCH1Q13635 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTCH1Q13635 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
PTCH1Q13635 Y_RNA.41-201ENST00000362646 102 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 RNU6-1042P-201ENST00000384204 107 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL589872.1-201ENST00000426602 288 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC010975.2-201ENST00000427781 588 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL627311.1-201ENST00000431514 115 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC009961.2-201ENST00000435771 251 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.03□□□□□ -2.08
PTCH1Q13635 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.03□□□□□ -2.08
PTCH1Q13635 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.03□□□□□ -2.08
PTCH1Q13635 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.03□□□□□ -2.08
PTCH1Q13635 RN7SKP298-201ENST00000515950 94 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC109329.1-201ENST00000518744 317 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC107953.1-201ENST00000522216 297 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 OR5B19P-201ENST00000531766 928 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.03□□□□□ -2.08
PTCH1Q13635 AC025678.1-201ENST00000567861 338 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 EIF1P4-201ENST00000572664 335 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC137800.2-201ENST00000574375 120 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 HMGN1P30-201ENST00000589286 268 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL031274.2-201ENST00000599419 203 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AL022154.1-201ENST00000604698 785 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC004492.1-201ENST00000607036 742 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC093788.1-201ENST00000609356 927 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC109347.2-201ENST00000610220 349 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC091304.9-201ENST00000612091 226 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 AC008250.2-201ENST00000615261 205 ntBASIC2.03□□□□□ -2.08
PTCH1Q13635 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTCH1Q13635 Y_RNA.3-201ENST00000362331 103 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 U8.3-201ENST00000363321 132 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU6-259P-201ENST00000383999 107 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 Y_RNA.582-201ENST00000391023 95 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 SRIP3-201ENST00000413200 219 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU2-46P-201ENST00000517038 113 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU6-1223P-201ENST00000517124 104 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU6-586P-201ENST00000517265 104 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 AP003181.2-201ENST00000528941 181 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 AC245505.1-201ENST00000556398 224 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.02□□□□□ -2.09
PTCH1Q13635 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.02□□□□□ -2.09
PTCH1Q13635 RBBP8P1-201ENST00000449447 1844 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 FARSBP1-201ENST00000435808 1778 ntBASIC2.02□□□□□ -2.09
PTCH1Q13635 RNU6-843P-201ENST00000384454 104 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 MIR598-201ENST00000384868 97 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 SNORA40.19-201ENST00000390846 128 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 Y_RNA.619-201ENST00000410951 90 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 UBE2V1P10-201ENST00000414685 269 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.01□□□□□ -2.09
PTCH1Q13635 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.01□□□□□ -2.09
PTCH1Q13635 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.01□□□□□ -2.09
PTCH1Q13635 snoU109.2-201ENST00000459316 135 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 MTCO2P29-201ENST00000465212 189 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 HMGB1P30-201ENST00000492455 606 ntBASIC2.01□□□□□ -2.09
PTCH1Q13635 AC010587.1-201ENST00000505809 469 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms