| PAX8 | Q06710 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC010889.1-201 | ENST00000566193 | 2666 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | KPNA2P1-201 | ENST00000458289 | 1591 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | OR5K1-202 | ENST00000642057 | 3466 nt | APPRIS P1 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RNU6-593P-201 | ENST00000364716 | 112 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | Y_RNA.394-201 | ENST00000383942 | 103 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RNU6-842P-201 | ENST00000384269 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | DEFB130A-201 | ENST00000400079 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | Y_RNA.594-201 | ENST00000410373 | 140 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | MTND4P28-201 | ENST00000426217 | 387 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC009414.1-201 | ENST00000427200 | 443 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RPS15AP10-201 | ENST00000432472 | 382 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | DEFB130B-201 | ENST00000437818 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | SNORD5.1-201 | ENST00000458800 | 75 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RPL7P42-201 | ENST00000481005 | 679 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RPS27P26-201 | ENST00000494583 | 239 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | LINC02494-201 | ENST00000509824 | 427 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RNU1-54P-201 | ENST00000517181 | 120 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | LINC02155-201 | ENST00000519215 | 407 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AL049775.2-201 | ENST00000557547 | 558 nt | TSL 4 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC025281.1-201 | ENST00000567026 | 265 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC009163.5-201 | ENST00000575421 | 637 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AL133255.1-201 | ENST00000606374 | 441 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | MIR3976-201 | ENST00000606807 | 139 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | RNU6ATAC35P-201 | ENST00000609276 | 444 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | DLEU2_6.1-201 | ENST00000610536 | 112 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | DLEU2_5.1-201 | ENST00000615567 | 84 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC159540.2-206 | ENST00000619371 | 355 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | IGHVIII-44-202 | ENST00000636235 | 289 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | SKIL-203 | ENST00000426052 | 2757 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | NETO1-202 | ENST00000397929 | 1849 nt | TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | OR5V1-217 | ENST00000641768 | 2763 nt | APPRIS P1 BASIC | 2.15 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | CCPG1-203 | ENST00000442196 | 3453 nt | APPRIS P1 TSL 2 BASIC | 2.15 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | ANKRD18EP-201 | ENST00000405487 | 2632 nt | BASIC | 2.15 | □□□□□ -2.06 | | |
| PAX8 | Q06710 | MT-ND1-201 | ENST00000361390 | 956 nt | APPRIS P1 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SNORD56.1-201 | ENST00000362913 | 68 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | Y_RNA.404-201 | ENST00000383978 | 102 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-692P-201 | ENST00000384496 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-1106P-201 | ENST00000390845 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNY4P36-201 | ENST00000391116 | 96 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-1050P-201 | ENST00000410388 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-293P-201 | ENST00000411259 | 106 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AL133396.1-201 | ENST00000432048 | 687 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC236972.2-201 | ENST00000434979 | 310 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AL513328.1-201 | ENST00000446460 | 224 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC006026.2-201 | ENST00000457376 | 180 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MED28P2-201 | ENST00000475771 | 317 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC103975.1-201 | ENST00000482506 | 483 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RPL23AP49-201 | ENST00000492925 | 468 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | HMGN1P13-201 | ENST00000505795 | 138 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SEMA6A-AS1-204 | ENST00000510682 | 521 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SNORD19.2-201 | ENST00000516978 | 73 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | ELOCP31-201 | ENST00000540463 | 467 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC022035.1-201 | ENST00000579923 | 302 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC009229.3-201 | ENST00000608056 | 282 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC084781.2-201 | ENST00000615568 | 161 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | CENPE-201 | ENST00000265148 | 8612 nt | APPRIS P1 TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | CHD1-201 | ENST00000284049 | 6457 nt | APPRIS P1 TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU4-76P-201 | ENST00000364509 | 141 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNA5SP126-201 | ENST00000365092 | 109 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | Y_RNA.460-201 | ENST00000384255 | 102 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-301P-201 | ENST00000384277 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-790P-201 | ENST00000384479 | 105 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-310P-201 | ENST00000384655 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU6-19P-201 | ENST00000384718 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | Y_RNA.646-201 | ENST00000410980 | 101 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RPS20P15-201 | ENST00000412792 | 311 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | PTGES3P4-201 | ENST00000426243 | 356 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MTND1P14-201 | ENST00000427400 | 950 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | Z82205.1-201 | ENST00000428456 | 297 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MTND3P9-201 | ENST00000429526 | 346 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC243964.1-201 | ENST00000441814 | 261 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | MTCO3P10-201 | ENST00000455912 | 772 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | RPS29P27-201 | ENST00000463711 | 170 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AP001025.1-201 | ENST00000486139 | 332 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| PAX8 | Q06710 | AC008892.1-201 | ENST00000511861 | 384 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |