Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
CBX1P83916 AC079140.5-201ENST00000507882 310 ntBASIC1.7□□□□□ -2.14
CBX1P83916 RNU2-69P-201ENST00000516061 100 ntBASIC1.7□□□□□ -2.14
CBX1P83916 RNU6-445P-201ENST00000516949 107 ntBASIC1.7□□□□□ -2.14
CBX1P83916 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.7□□□□□ -2.14
CBX1P83916 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.7□□□□□ -2.14
CBX1P83916 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.7□□□□□ -2.14
CBX1P83916 U2.15-201ENST00000611544 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.16-201ENST00000613119 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.12-201ENST00000613778 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.20-201ENST00000613956 192 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.9-201ENST00000615427 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CBX1P83916 U2.11-201ENST00000616345 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.2-201ENST00000616535 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.3-201ENST00000617785 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.19-201ENST00000618602 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 RNU2-1-201ENST00000618664 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.6-201ENST00000619225 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.5-201ENST00000619465 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U2.10-201ENST00000620268 191 ntBASIC1.7□□□□□ -2.14
CBX1P83916 AC130454.1-201ENST00000622948 401 ntBASIC1.7□□□□□ -2.14
CBX1P83916 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CBX1P83916 MIR219B-201ENST00000637023 88 ntBASIC1.7□□□□□ -2.14
CBX1P83916 AC241585.2-209ENST00000638217 143 ntBASIC1.7□□□□□ -2.14
CBX1P83916 AP000560.1-201ENST00000624150 1937 ntBASIC1.7□□□□□ -2.14
CBX1P83916 U3.4-201ENST00000363352 213 ntBASIC1.69□□□□□ -2.14
CBX1P83916 RNU6-142P-201ENST00000384019 107 ntBASIC1.69□□□□□ -2.14
CBX1P83916 RNU6-1127P-201ENST00000384580 107 ntBASIC1.69□□□□□ -2.14
CBX1P83916 RNU6-606P-201ENST00000384721 111 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
CBX1P83916 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.69□□□□□ -2.14
CBX1P83916 AC244670.1-201ENST00000436879 112 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AL035666.1-201ENST00000446195 348 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC013470.1-201ENST00000453438 462 ntBASIC1.69□□□□□ -2.14
CBX1P83916 RNU6-333P-201ENST00000459117 107 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC132942.1-201ENST00000486753 483 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.69□□□□□ -2.14
CBX1P83916 RPL38P4-201ENST00000502376 214 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC010486.2-201ENST00000505572 483 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC092436.1-201ENST00000506450 503 ntBASIC1.69□□□□□ -2.14
CBX1P83916 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.69□□□□□ -2.14
CBX1P83916 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.69□□□□□ -2.14
CBX1P83916 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
CBX1P83916 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
CBX1P83916 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CBX1P83916 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
CBX1P83916 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CBX1P83916 AL390237.1-201ENST00000404226 1415 ntBASIC1.68□□□□□ -2.14
CBX1P83916 SNORA16.2-201ENST00000390991 127 ntBASIC1.68□□□□□ -2.14
CBX1P83916 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX1P83916 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX1P83916 AC010975.2-201ENST00000427781 588 ntBASIC1.68□□□□□ -2.14
CBX1P83916 HSPE1P21-201ENST00000438283 308 ntBASIC1.68□□□□□ -2.14
CBX1P83916 MTND1P27-201ENST00000451117 902 ntBASIC1.68□□□□□ -2.14
CBX1P83916 MTND3P7-201ENST00000474435 343 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC023790.1-201ENST00000482174 347 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.68□□□□□ -2.14
CBX1P83916 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX1P83916 RPL23AP94-201ENST00000512518 302 ntBASIC1.68□□□□□ -2.14
CBX1P83916 Y_RNA.717-201ENST00000517106 92 ntBASIC1.68□□□□□ -2.14
CBX1P83916 RNA5SP490-201ENST00000517141 136 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.68□□□□□ -2.14
CBX1P83916 AC145350.1-201ENST00000567426 208 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.68□□□□□ -2.14
CBX1P83916 RSL24D1P11-201ENST00000591045 491 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC110760.3-201ENST00000598794 467 ntBASIC1.68□□□□□ -2.14
CBX1P83916 VN1R107P-201ENST00000601784 209 ntBASIC1.68□□□□□ -2.14
CBX1P83916 uc_338.5-201ENST00000611839 155 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC072046.2-201ENST00000618366 268 ntBASIC1.68□□□□□ -2.14
CBX1P83916 AC233981.2-201ENST00000611524 1614 ntBASIC1.68□□□□□ -2.14
CBX1P83916 CBX3P1-201ENST00000325243 554 ntBASIC1.67□□□□□ -2.14
CBX1P83916 RNA5SP493-201ENST00000364115 91 ntBASIC1.67□□□□□ -2.14
CBX1P83916 RNU4-56P-201ENST00000364700 142 ntBASIC1.67□□□□□ -2.14
CBX1P83916 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
CBX1P83916 RN7SKP192-201ENST00000411291 327 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AL590135.1-201ENST00000422215 156 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC019205.3-201ENST00000424573 156 ntBASIC1.67□□□□□ -2.14
CBX1P83916 MTCO3P46-201ENST00000425787 232 ntBASIC1.67□□□□□ -2.14
CBX1P83916 VN1R108P-201ENST00000431580 830 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.67□□□□□ -2.14
CBX1P83916 AC003989.2-201ENST00000440224 169 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC016700.2-201ENST00000446011 156 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AL031274.1-201ENST00000450334 232 ntBASIC1.67□□□□□ -2.14
CBX1P83916 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.67□□□□□ -2.14
CBX1P83916 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC027575.1-201ENST00000481064 460 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC015911.1-201ENST00000495111 156 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.67□□□□□ -2.14
CBX1P83916 RNA5SP61-201ENST00000516453 100 ntBASIC1.67□□□□□ -2.14
CBX1P83916 SNORA25.17-201ENST00000517184 124 ntBASIC1.67□□□□□ -2.14
CBX1P83916 COPS8P3-201ENST00000526024 482 ntBASIC1.67□□□□□ -2.14
CBX1P83916 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.67□□□□□ -2.14
CBX1P83916 AC002044.1-201ENST00000606707 158 ntBASIC1.67□□□□□ -2.14
CBX1P83916 RNU6-26P-201ENST00000383985 107 ntBASIC1.66□□□□□ -2.14
CBX1P83916 SNORA70B-201ENST00000384210 135 ntBASIC1.66□□□□□ -2.14
CBX1P83916 RPS29P13-201ENST00000402041 169 ntBASIC1.66□□□□□ -2.14
CBX1P83916 RNU2-9P-201ENST00000410194 145 ntBASIC1.66□□□□□ -2.14
CBX1P83916 RNU2-29P-201ENST00000410423 189 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms