Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC090525.1-201ENST00000479116 478 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AC016632.1-201ENST00000503994 196 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CL1P78423 SCARNA13-201ENST00000516672 275 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 SNORA31.16-201ENST00000516773 139 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 RNU1-54P-201ENST00000517181 120 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AC105029.1-201ENST00000520250 669 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CX3CL1P78423 HSPE1P20-201ENST00000538133 289 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC004486.1-201ENST00000546846 233 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 POLR3GP2-201ENST00000588366 668 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AC243960.4-201ENST00000600532 288 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 RPL23AP88-201ENST00000605759 454 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC009994.1-201ENST00000606889 253 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC090115.4-201ENST00000609970 188 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AL450472.1-202ENST00000637286 180 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CX3CL1P78423 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CL1P78423 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.27□□□□□ -2.05
CX3CL1P78423 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AL161431.1-201ENST00000618966 4205 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.26□□□□□ -2.05
CX3CL1P78423 AC092268.1-201ENST00000342691 405 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 Y_RNA.142-201ENST00000363491 102 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 RNA5SP125-201ENST00000364843 120 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 SNORA9-201ENST00000384215 133 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 SNORA36A-201ENST00000384221 132 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CX3CL1P78423 RPL37P10-201ENST00000412884 288 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 NCOR1P3-201ENST00000420479 303 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC019205.3-201ENST00000424573 156 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CL1P78423 AC016700.2-201ENST00000446011 156 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 FTH1P25-201ENST00000447665 469 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC015911.1-201ENST00000495111 156 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 HMGB1P35-201ENST00000503360 598 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CL1P78423 RNU6-1016P-201ENST00000516689 94 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC007375.1-201ENST00000554513 578 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CX3CL1P78423 MIR5571-201ENST00000577998 113 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CX3CL1P78423 MIR3670-2-201ENST00000582974 65 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 MIR3670-1-201ENST00000584160 65 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 MIR3670-3-201ENST00000584855 65 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC060766.3-201ENST00000591442 263 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AL034555.1-201ENST00000604816 211 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC093732.2-201ENST00000607950 274 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CX3CL1P78423 MIR3670-4-201ENST00000612260 65 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 AC104260.1-201ENST00000616660 539 ntBASIC2.26□□□□□ -2.05
CX3CL1P78423 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CL1P78423 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.26□□□□□ -2.05
CX3CL1P78423 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CX3CL1P78423 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CX3CL1P78423 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CX3CL1P78423 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.26□□□□□ -2.05
CX3CL1P78423 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CL1P78423 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CL1P78423 snoU2_19.1-201ENST00000362361 80 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 RNU6-1059P-201ENST00000363752 98 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 RNU6-784P-201ENST00000384330 106 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 SNORA44-201ENST00000384584 132 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 MIR128-1-201ENST00000384921 82 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 MIR592-201ENST00000384959 97 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CX3CL1P78423 SNORA48.2-201ENST00000390926 124 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 RNU6-1009P-201ENST00000390996 107 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 UBA52P6-201ENST00000399822 382 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 USP9YP30-201ENST00000430729 455 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CL1P78423 GPM6BP3-201ENST00000442797 145 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 RPS29P26-201ENST00000477483 171 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC104564.1-201ENST00000493028 407 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC022447.4-201ENST00000504053 364 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 ACA59.1-201ENST00000515966 143 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CL1P78423 IMMP1LP2-201ENST00000552954 492 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CL1P78423 AC023824.2-201ENST00000566185 400 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 MIR3200-201ENST00000580767 85 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 MIR3136-201ENST00000583498 78 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AL670379.2-201ENST00000604983 252 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 AC090517.3-201ENST00000625170 141 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.25□□□□□ -2.05
CX3CL1P78423 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
CX3CL1P78423 AC092593.1-201ENST00000515413 1815 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 Y_RNA.70-201ENST00000362886 110 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 VTRNA1-1-201ENST00000363120 99 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 RNU6-593P-201ENST00000364716 112 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 Y_RNA.473-201ENST00000384333 102 ntBASIC2.24□□□□□ -2.05
CX3CL1P78423 Y_RNA.474-201ENST00000384341 102 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms