Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL590084.2-201ENST00000401481 382 ntBASIC0□□□□□ -2.41
UBA52P62987 AL133264.1-201ENST00000407157 562 ntBASIC0□□□□□ -2.41
UBA52P62987 MTND4P20-201ENST00000424125 869 ntBASIC0□□□□□ -2.41
UBA52P62987 TXNL1P1-201ENST00000429528 554 ntBASIC0□□□□□ -2.41
UBA52P62987 GTF2IP3-201ENST00000433887 494 ntBASIC0□□□□□ -2.41
UBA52P62987 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0□□□□□ -2.41
UBA52P62987 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0□□□□□ -2.41
UBA52P62987 MED28P2-201ENST00000475771 317 ntBASIC0□□□□□ -2.41
UBA52P62987 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0□□□□□ -2.41
UBA52P62987 AC009646.1-201ENST00000510455 318 ntBASIC0□□□□□ -2.41
UBA52P62987 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0□□□□□ -2.41
UBA52P62987 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0□□□□□ -2.41
UBA52P62987 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0□□□□□ -2.41
UBA52P62987 AC009902.1-201ENST00000519351 183 ntBASIC0□□□□□ -2.41
UBA52P62987 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0□□□□□ -2.41
UBA52P62987 BNIP3P6-201ENST00000549284 499 ntBASIC0□□□□□ -2.41
UBA52P62987 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
UBA52P62987 DPPA3P3-201ENST00000603842 430 ntBASIC0□□□□□ -2.41
UBA52P62987 RMST_4.1-201ENST00000616886 107 ntBASIC0□□□□□ -2.41
UBA52P62987 MIR6086-201ENST00000638065 55 ntBASIC0□□□□□ -2.41
UBA52P62987 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
UBA52P62987 MTND5P16-201ENST00000460269 1703 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 RAP1BP3-201ENST00000407180 549 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 RNA5SP111-201ENST00000411386 101 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 AL606489.2-201ENST00000433886 234 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 COX7BP2-201ENST00000437976 242 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 HAR1A.1-201ENST00000459583 118 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
UBA52P62987 AC104629.1-201ENST00000494226 508 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.01□□□□□ -2.41
UBA52P62987 AC005741.1-201ENST00000511094 432 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 AC079140.3-201ENST00000511111 550 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 SNORD60.2-201ENST00000516883 86 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.01□□□□□ -2.41
UBA52P62987 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.01□□□□□ -2.41
UBA52P62987 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
UBA52P62987 MIR4782-201ENST00000577987 79 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 MIR4636-201ENST00000582271 80 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 AL356157.2-201ENST00000605122 111 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 MIR3976-201ENST00000606807 139 ntBASIC-0.01□□□□□ -2.41
UBA52P62987 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.01□□□□□ -2.41
UBA52P62987 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RNU6-622P-201ENST00000384272 103 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RNU6-843P-201ENST00000384454 104 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RPS3AP36-201ENST00000398190 775 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 MTCO2P31-201ENST00000402702 684 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.02□□□□□ -2.41
UBA52P62987 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 MTCO1P3-201ENST00000429327 192 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RPS15AP10-201ENST00000432472 382 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.02□□□□□ -2.41
UBA52P62987 MTCO3P45-201ENST00000443036 613 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RNFT1P2-201ENST00000443064 757 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.02□□□□□ -2.41
UBA52P62987 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.02□□□□□ -2.41
UBA52P62987 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 RPS26P45-201ENST00000471748 340 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 TMEM251P1-201ENST00000503717 318 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.02□□□□□ -2.41
UBA52P62987 AF038458.1-201ENST00000588406 262 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 AC012557.2-201ENST00000605919 418 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 AC024060.1-201ENST00000607052 494 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 AC100812.1-201ENST00000607622 580 ntBASIC-0.02□□□□□ -2.41
UBA52P62987 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.02□□□□□ -2.41
UBA52P62987 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
UBA52P62987 RNU6-487P-201ENST00000365430 104 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 RNU6-359P-201ENST00000365466 108 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 MIR217-201ENST00000384817 110 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 SNORD99-201ENST00000408612 74 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 MIR1912-201ENST00000410389 80 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 TPMTP2-201ENST00000414372 726 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
UBA52P62987 BX119904.4-201ENST00000424402 301 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AL606662.1-201ENST00000445763 553 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.03□□□□□ -2.41
UBA52P62987 BTF3P15-201ENST00000455606 336 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AC110760.3-202ENST00000515177 371 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AC091163.3-201ENST00000518269 1144 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 SUMO2P18-201ENST00000518873 252 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
UBA52P62987 AC126365.2-201ENST00000580630 379 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AP001981.2-201ENST00000603241 418 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 RNU6-87P-201ENST00000607561 108 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.03□□□□□ -2.41
UBA52P62987 AC099654.9-201ENST00000637055 678 ntBASIC-0.03□□□□□ -2.41
UBA52P62987 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms