Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SNORA32.2-201ENST00000384049 122 ntBASIC0.3□□□□□ -2.36
LSM3P62310 MIR200A-201ENST00000384875 90 ntBASIC0.3□□□□□ -2.36
LSM3P62310 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
LSM3P62310 MTCO1P17-201ENST00000411522 491 ntBASIC0.3□□□□□ -2.36
LSM3P62310 TIMM9P2-201ENST00000419324 266 ntBASIC0.3□□□□□ -2.36
LSM3P62310 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.3□□□□□ -2.36
LSM3P62310 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.3□□□□□ -2.36
LSM3P62310 AL627311.1-201ENST00000431514 115 ntBASIC0.3□□□□□ -2.36
LSM3P62310 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.3□□□□□ -2.36
LSM3P62310 TOMM22P6-201ENST00000465035 409 ntBASIC0.3□□□□□ -2.36
LSM3P62310 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.3□□□□□ -2.36
LSM3P62310 RPS26P48-201ENST00000491713 339 ntBASIC0.3□□□□□ -2.36
LSM3P62310 HMGN1P7-201ENST00000491722 313 ntBASIC0.3□□□□□ -2.36
LSM3P62310 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.3□□□□□ -2.36
LSM3P62310 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.3□□□□□ -2.36
LSM3P62310 RNA5SP384-201ENST00000516615 116 ntBASIC0.3□□□□□ -2.36
LSM3P62310 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
LSM3P62310 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.3□□□□□ -2.36
LSM3P62310 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
LSM3P62310 SNORA33-201ENST00000363664 130 ntBASIC0.29□□□□□ -2.36
LSM3P62310 RNU5A-8P-201ENST00000364102 114 ntBASIC0.29□□□□□ -2.36
LSM3P62310 snoZ40.1-201ENST00000364540 72 ntBASIC0.29□□□□□ -2.36
LSM3P62310 RPL23AP95-201ENST00000426806 265 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
LSM3P62310 MTCYBP42-201ENST00000444653 1130 ntBASIC0.29□□□□□ -2.36
LSM3P62310 PAXBP1P1-201ENST00000449315 447 ntBASIC0.29□□□□□ -2.36
LSM3P62310 TPRKBP1-201ENST00000456243 481 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC010531.2-201ENST00000465012 153 ntBASIC0.29□□□□□ -2.36
LSM3P62310 RPL39P38-201ENST00000467018 153 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC108210.2-201ENST00000503681 201 ntBASIC0.29□□□□□ -2.36
LSM3P62310 MTCO3P9-201ENST00000506989 781 ntBASIC0.29□□□□□ -2.36
LSM3P62310 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.29□□□□□ -2.36
LSM3P62310 RNU6-922P-201ENST00000516753 99 ntBASIC0.29□□□□□ -2.36
LSM3P62310 HSPE1P4-201ENST00000550617 308 ntBASIC0.29□□□□□ -2.36
LSM3P62310 CYP4A27P-201ENST00000567218 190 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC110760.3-201ENST00000598794 467 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC078880.5-201ENST00000617845 421 ntBASIC0.29□□□□□ -2.36
LSM3P62310 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC005858.4-201ENST00000623191 700 ntBASIC0.29□□□□□ -2.36
LSM3P62310 AC097372.5-201ENST00000623665 376 ntBASIC0.29□□□□□ -2.36
LSM3P62310 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.29□□□□□ -2.36
LSM3P62310 OR4G2P-201ENST00000328113 903 ntBASIC0.28□□□□□ -2.36
LSM3P62310 RNA5SP99-201ENST00000364020 114 ntBASIC0.28□□□□□ -2.36
LSM3P62310 RNU6-438P-201ENST00000365561 103 ntBASIC0.28□□□□□ -2.36
LSM3P62310 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.28□□□□□ -2.36
LSM3P62310 RNU6-278P-201ENST00000390945 109 ntBASIC0.28□□□□□ -2.36
LSM3P62310 SNORD12-201ENST00000391002 90 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AL355994.1-201ENST00000424379 260 ntBASIC0.28□□□□□ -2.36
LSM3P62310 MTCO2P1-201ENST00000424648 477 ntBASIC0.28□□□□□ -2.36
LSM3P62310 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.28□□□□□ -2.36
LSM3P62310 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.28□□□□□ -2.36
LSM3P62310 AC245047.7-201ENST00000440265 293 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AC007969.2-201ENST00000441891 191 ntBASIC0.28□□□□□ -2.36
LSM3P62310 MTND2P3-201ENST00000452458 470 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.28□□□□□ -2.36
LSM3P62310 AC108078.2-201ENST00000510750 236 ntBASIC0.28□□□□□ -2.36
LSM3P62310 RNU6-677P-201ENST00000516914 101 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AC091489.2-201ENST00000566263 604 ntBASIC0.28□□□□□ -2.36
LSM3P62310 VN1R87P-201ENST00000596706 487 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AC016727.2-201ENST00000603988 621 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AL034555.1-201ENST00000604816 211 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AL158163.2-201ENST00000619110 700 ntBASIC0.28□□□□□ -2.36
LSM3P62310 AC131159.1-201ENST00000621854 213 ntBASIC0.28□□□□□ -2.36
LSM3P62310 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
LSM3P62310 MIR412-201ENST00000362142 91 ntBASIC0.27□□□□□ -2.37
LSM3P62310 RNU6-384P-201ENST00000364900 104 ntBASIC0.27□□□□□ -2.37
LSM3P62310 RNU6-110P-201ENST00000384508 104 ntBASIC0.27□□□□□ -2.37
LSM3P62310 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
LSM3P62310 MTCO3P18-201ENST00000440206 761 ntBASIC0.27□□□□□ -2.37
LSM3P62310 MTCO1P27-201ENST00000448269 226 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC098869.1-201ENST00000481627 292 ntBASIC0.27□□□□□ -2.37
LSM3P62310 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.27□□□□□ -2.37
LSM3P62310 MTCO3P7-201ENST00000510008 774 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AF131216.2-201ENST00000512316 564 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.27□□□□□ -2.37
LSM3P62310 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.27□□□□□ -2.37
LSM3P62310 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.27□□□□□ -2.37
LSM3P62310 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.27□□□□□ -2.37
LSM3P62310 TPRKBP2-201ENST00000565969 475 ntBASIC0.27□□□□□ -2.37
LSM3P62310 MIR3146-201ENST00000580367 79 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.27□□□□□ -2.37
LSM3P62310 DEFB131E-202ENST00000602581 683 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AL022154.1-201ENST00000604698 785 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC018889.1-201ENST00000605372 397 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC016727.1-205ENST00000605437 569 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC008147.4-201ENST00000617570 1204 ntBASIC0.27□□□□□ -2.37
LSM3P62310 AC092104.1-201ENST00000497346 1441 ntBASIC0.27□□□□□ -2.37
LSM3P62310 RNU6-1123P-201ENST00000362347 106 ntBASIC0.26□□□□□ -2.37
LSM3P62310 RNU6-190P-201ENST00000384154 102 ntBASIC0.26□□□□□ -2.37
LSM3P62310 MIR544A-201ENST00000384855 91 ntBASIC0.26□□□□□ -2.37
LSM3P62310 RNU6-1054P-201ENST00000411293 104 ntBASIC0.26□□□□□ -2.37
LSM3P62310 VPS26BP1-201ENST00000417155 755 ntBASIC0.26□□□□□ -2.37
LSM3P62310 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.26□□□□□ -2.37
LSM3P62310 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.26□□□□□ -2.37
LSM3P62310 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.26□□□□□ -2.37
LSM3P62310 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.26□□□□□ -2.37
LSM3P62310 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.26□□□□□ -2.37
LSM3P62310 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.26□□□□□ -2.37
LSM3P62310 SNORA59A-201ENST00000459326 152 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms