Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTATP6P3-201ENST00000581686 676 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CKS1BP61024 AC243829.3-201ENST00000622177 108 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 MIR16-2-201ENST00000362117 81 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 RNU6-701P-201ENST00000384059 107 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CKS1BP61024 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CKS1BP61024 RPS3AP37-201ENST00000419176 745 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 FABP5P4-201ENST00000437203 171 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 AL583843.1-201ENST00000456070 346 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 RNU5F-2P-201ENST00000516066 82 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.18□□□□□ -2.38
CKS1BP61024 AC012557.2-201ENST00000605919 418 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 AC021506.2-201ENST00000612354 169 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 SNORD3E-202ENST00000627253 216 ntBASIC0.18□□□□□ -2.38
CKS1BP61024 RNU6-792P-201ENST00000363490 107 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 SNORD114-22-201ENST00000365423 72 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 Y_RNA.363-201ENST00000365529 113 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 BTF3L4P1-201ENST00000413813 468 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AL591212.2-201ENST00000433923 257 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC006026.2-201ENST00000457376 180 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AL162395.1-201ENST00000457882 422 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 RNU7-34P-201ENST00000459394 64 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC091435.1-201ENST00000505442 584 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.17□□□□□ -2.38
CKS1BP61024 AC067942.3-201ENST00000512025 362 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 MIR5000-201ENST00000577717 103 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.17□□□□□ -2.38
CKS1BP61024 AC068620.3-201ENST00000602749 560 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AL031281.1-201ENST00000604049 488 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC016911.1-201ENST00000613297 452 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 SCARNA4-202ENST00000625402 129 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 AL442644.1-201ENST00000454390 3105 ntBASIC0.17□□□□□ -2.38
CKS1BP61024 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.17□□□□□ -2.38
CKS1BP61024 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 RNU5B-1-201ENST00000363286 116 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 Y_RNA.191-201ENST00000363972 113 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 SNORA4.2-201ENST00000365313 147 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 SNORA4.3-201ENST00000365564 137 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 MIR548J-201ENST00000408833 112 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 Y_RNA.623-201ENST00000411128 95 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AL606662.1-201ENST00000445763 553 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC079776.3-201ENST00000450665 370 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC233266.1-201ENST00000454518 96 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.16□□□□□ -2.38
CKS1BP61024 RNU6-551P-201ENST00000516661 103 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.16□□□□□ -2.38
CKS1BP61024 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.16□□□□□ -2.38
CKS1BP61024 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.16□□□□□ -2.38
CKS1BP61024 HMGN1P30-201ENST00000589286 268 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC016727.2-201ENST00000603988 621 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC007363.1-201ENST00000604736 620 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC018889.1-201ENST00000605372 397 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC242852.1-201ENST00000612151 96 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 MIR6788-201ENST00000618842 66 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC244015.1-201ENST00000622301 99 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC112204.3-201ENST00000623822 332 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 AC068787.1-201ENST00000623908 691 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 MTND5P42-201ENST00000637720 498 ntBASIC0.16□□□□□ -2.38
CKS1BP61024 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-534P-201ENST00000364877 106 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-438P-201ENST00000365561 103 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-650P-201ENST00000365658 111 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-16P-201ENST00000384385 107 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-950P-201ENST00000384651 107 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 AC011233.1-201ENST00000422812 283 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 MTND4P20-201ENST00000424125 869 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 MTCO3P28-201ENST00000513351 515 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 RNU6-237P-201ENST00000515985 71 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 SUMO2P16-201ENST00000519475 264 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.15□□□□□ -2.39
CKS1BP61024 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS1BP61024 MIR151B-201ENST00000584249 96 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.15□□□□□ -2.39
CKS1BP61024 AC004987.4-201ENST00000603383 338 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 AC231657.1-201ENST00000624313 397 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 AL359740.1-201ENST00000624340 592 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 PCMTD1P7-201ENST00000634506 357 ntBASIC0.15□□□□□ -2.39
CKS1BP61024 VTRNA1-3-201ENST00000365645 89 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
CKS1BP61024 AL079342.2-201ENST00000403367 482 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 MTCO2P1-201ENST00000424648 477 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS1BP61024 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS1BP61024 AC022493.2-201ENST00000506122 481 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AC010468.3-201ENST00000508225 458 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AC010587.2-201ENST00000511727 448 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 RNU6-496P-201ENST00000516145 99 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 RNU6-914P-201ENST00000516749 109 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS1BP61024 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS1BP61024 ZNF92P2-201ENST00000600543 1059 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AL513534.2-201ENST00000603836 250 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AL355816.2-201ENST00000610049 647 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 AC092106.3-201ENST00000611308 722 ntBASIC0.14□□□□□ -2.39
CKS1BP61024 MIR6504-201ENST00000613520 61 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms