Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC115990.1-201ENST00000526957 301 ntBASIC1□□□□□ -2.25
ACTBP60709 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1□□□□□ -2.25
ACTBP60709 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1□□□□□ -2.25
ACTBP60709 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
ACTBP60709 MIR4781-201ENST00000585250 76 ntBASIC1□□□□□ -2.25
ACTBP60709 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
ACTBP60709 AC008521.1-201ENST00000587471 187 ntBASIC1□□□□□ -2.25
ACTBP60709 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1□□□□□ -2.25
ACTBP60709 AL158050.2-201ENST00000605336 568 ntBASIC1□□□□□ -2.25
ACTBP60709 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ACTBP60709 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
ACTBP60709 AL353770.2-201ENST00000620024 78 ntBASIC1□□□□□ -2.25
ACTBP60709 AL031667.3-201ENST00000620124 655 ntBASIC1□□□□□ -2.25
ACTBP60709 AP002371.2-201ENST00000624450 503 ntBASIC1□□□□□ -2.25
ACTBP60709 AL157786.1-207ENST00000627771 695 ntBASIC1□□□□□ -2.25
ACTBP60709 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.99□□□□□ -2.25
ACTBP60709 AC123900.1-201ENST00000420390 96 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AC137499.1-201ENST00000427602 88 ntBASIC0.99□□□□□ -2.25
ACTBP60709 MED13P1-201ENST00000428342 171 ntBASIC0.99□□□□□ -2.25
ACTBP60709 CALM2P2-201ENST00000428512 440 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.99□□□□□ -2.25
ACTBP60709 MTCYBP39-201ENST00000437562 491 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.99□□□□□ -2.25
ACTBP60709 AL049829.1-201ENST00000465411 156 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AC005840.1-201ENST00000498412 377 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AC022447.4-201ENST00000504053 364 ntBASIC0.99□□□□□ -2.25
ACTBP60709 RNU6-685P-201ENST00000517088 95 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AC090115.3-201ENST00000553218 849 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AC091489.2-201ENST00000566263 604 ntBASIC0.99□□□□□ -2.25
ACTBP60709 MIR4509-3-201ENST00000578671 94 ntBASIC0.99□□□□□ -2.25
ACTBP60709 MIR4509-2-201ENST00000583920 94 ntBASIC0.99□□□□□ -2.25
ACTBP60709 AL034555.1-201ENST00000604816 211 ntBASIC0.99□□□□□ -2.25
ACTBP60709 MIR4509-1-201ENST00000618224 94 ntBASIC0.99□□□□□ -2.25
ACTBP60709 U4.7-201ENST00000638126 106 ntBASIC0.99□□□□□ -2.25
ACTBP60709 Y_RNA.18-201ENST00000362461 102 ntBASIC0.98□□□□□ -2.25
ACTBP60709 Y_RNA.22-201ENST00000362492 102 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU6-660P-201ENST00000364566 109 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU5E-7P-201ENST00000365290 117 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU6-61P-201ENST00000365528 109 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU6-360P-201ENST00000390944 104 ntBASIC0.98□□□□□ -2.25
ACTBP60709 MTCYBP36-201ENST00000404146 440 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AL355143.1-201ENST00000407101 841 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU6-607P-201ENST00000411283 108 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AL161935.2-201ENST00000414627 60 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RPS24P1-201ENST00000438550 371 ntBASIC0.98□□□□□ -2.25
ACTBP60709 PGBD4P5-201ENST00000445958 426 ntBASIC0.98□□□□□ -2.25
ACTBP60709 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.98□□□□□ -2.25
ACTBP60709 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.98□□□□□ -2.25
ACTBP60709 AC084364.2-201ENST00000546924 395 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.98□□□□□ -2.25
ACTBP60709 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.98□□□□□ -2.25
ACTBP60709 MIR5094-201ENST00000578766 85 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC008752.3-201ENST00000588113 712 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC073539.2-201ENST00000597113 165 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC073413.2-201ENST00000604332 360 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC105148.1-201ENST00000604961 409 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC018714.1-201ENST00000605028 208 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AL031775.1-201ENST00000607014 887 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC104073.3-201ENST00000610942 955 ntBASIC0.98□□□□□ -2.25
ACTBP60709 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AL607023.1-201ENST00000620045 248 ntBASIC0.98□□□□□ -2.25
ACTBP60709 AC120349.3-201ENST00000624377 529 ntBASIC0.98□□□□□ -2.25
ACTBP60709 Z69720.2-201ENST00000624755 279 ntBASIC0.98□□□□□ -2.25
ACTBP60709 RNU6-105P-201ENST00000363909 104 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RNU4-91P-201ENST00000364778 135 ntBASIC0.97□□□□□ -2.25
ACTBP60709 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
ACTBP60709 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
ACTBP60709 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
ACTBP60709 MIR544A-201ENST00000384855 91 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.97□□□□□ -2.25
ACTBP60709 SNORA12-201ENST00000391162 147 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RNU2-39P-201ENST00000410604 198 ntBASIC0.97□□□□□ -2.25
ACTBP60709 CYCSP33-201ENST00000414485 327 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RPL21P90-201ENST00000415692 466 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTBP60709 EIF1P1-201ENST00000421436 341 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTBP60709 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.97□□□□□ -2.25
ACTBP60709 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ACTBP60709 ART2BP-201ENST00000453501 499 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RPL9P9-202ENST00000466501 579 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC010587.1-201ENST00000505809 469 ntBASIC0.97□□□□□ -2.25
ACTBP60709 RBBP4P6-201ENST00000508098 202 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTBP60709 AC097473.1-201ENST00000508142 408 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC005741.1-201ENST00000511094 432 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC112206.4-201ENST00000515142 405 ntBASIC0.97□□□□□ -2.25
ACTBP60709 MIR449C-201ENST00000516047 92 ntBASIC0.97□□□□□ -2.25
ACTBP60709 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTBP60709 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.97□□□□□ -2.25
ACTBP60709 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.97□□□□□ -2.25
ACTBP60709 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.97□□□□□ -2.25
ACTBP60709 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ACTBP60709 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
ACTBP60709 RNU6-26P-201ENST00000383985 107 ntBASIC0.96□□□□□ -2.26
ACTBP60709 RNU6-142P-201ENST00000384019 107 ntBASIC0.96□□□□□ -2.26
ACTBP60709 RNU6-1200P-201ENST00000384162 107 ntBASIC0.96□□□□□ -2.26
ACTBP60709 Y_RNA.608-201ENST00000410647 95 ntBASIC0.96□□□□□ -2.26
ACTBP60709 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.96□□□□□ -2.26
ACTBP60709 AC007283.2-201ENST00000424739 197 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms