Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 MTND2P33-201ENST00000506452 1031 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC010486.3-201ENST00000511602 785 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 AP001893.2-201ENST00000526949 202 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC243960.4-201ENST00000600532 288 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AL078605.1-201ENST00000603529 500 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC009509.4-201ENST00000619202 509 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 MIR1248-201ENST00000629190 106 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC241585.2-209ENST00000638217 143 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
PKNOX1P55347 ELL2P3-201ENST00000457883 1602 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PKNOX1P55347 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PKNOX1P55347 U8.2-201ENST00000363156 134 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 Y_RNA.111-201ENST00000363248 100 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.68□□□□□ -2.14
PKNOX1P55347 RNU6-1103P-201ENST00000384150 107 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 RNA5SP465-201ENST00000391195 109 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 RPS29P13-201ENST00000402041 169 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AL033519.2-201ENST00000403958 392 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.68□□□□□ -2.14
PKNOX1P55347 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX1P55347 MTCYBP8-201ENST00000422855 651 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 BX510359.4-201ENST00000423750 193 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 MTCO2P19-201ENST00000427513 598 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX1P55347 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.68□□□□□ -2.14
PKNOX1P55347 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX1P55347 PTP4A1P4-201ENST00000512479 322 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AC109479.2-201ENST00000517842 174 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 COPS8P3-201ENST00000526024 482 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AL137161.1-201ENST00000532231 390 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AP000873.5-201ENST00000533906 236 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 HIF1AP1-201ENST00000553642 175 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AC091544.4-201ENST00000555268 342 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX1P55347 AC104581.2-201ENST00000572227 430 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 BNIP3P16-201ENST00000589779 534 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.68□□□□□ -2.14
PKNOX1P55347 AC018889.1-201ENST00000605372 397 ntBASIC1.68□□□□□ -2.14
PKNOX1P55347 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PKNOX1P55347 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PKNOX1P55347 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PKNOX1P55347 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PKNOX1P55347 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU4-15P-201ENST00000362613 141 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 Y_RNA.77-201ENST00000362962 107 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU6-743P-201ENST00000364151 106 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU6-1164P-201ENST00000364428 107 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU6-43P-201ENST00000384302 107 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU6-517P-201ENST00000384362 110 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AL356432.1-201ENST00000405809 419 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AL353193.1-201ENST00000421444 268 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX1P55347 AL645568.3-201ENST00000433683 316 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 SNRPFP3-201ENST00000457792 225 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 RNU7-180P-201ENST00000459240 63 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX1P55347 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX1P55347 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.67□□□□□ -2.14
PKNOX1P55347 RSL24D1P11-201ENST00000591045 491 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.67□□□□□ -2.14
PKNOX1P55347 AC091805.2-201ENST00000603848 235 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AL034555.1-201ENST00000604816 211 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AL773524.1-201ENST00000614065 229 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC022079.1-201ENST00000621546 602 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 AC005609.4-201ENST00000625071 447 ntBASIC1.67□□□□□ -2.14
PKNOX1P55347 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PKNOX1P55347 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
PKNOX1P55347 SNORD32A-201ENST00000364805 84 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 Y_RNA.500-201ENST00000384466 111 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 SNORA8-201ENST00000384574 139 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 RNU6-1245P-201ENST00000411130 106 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.66□□□□□ -2.14
PKNOX1P55347 CBX3P6-201ENST00000430257 527 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 MTATP6P17-201ENST00000431030 672 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 HMGN2P3-201ENST00000433603 273 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 HMGN2P5-201ENST00000436882 273 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 RPL7P54-201ENST00000438336 674 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC073415.1-201ENST00000449240 153 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 RNU7-63P-201ENST00000459054 62 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 RNU7-167P-201ENST00000459160 62 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC087884.1-201ENST00000469738 328 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC010424.1-201ENST00000506336 297 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 CCDC34P1-201ENST00000507441 517 ntBASIC1.66□□□□□ -2.14
PKNOX1P55347 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.66□□□□□ -2.14
PKNOX1P55347 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PKNOX1P55347 AC115990.1-201ENST00000526957 301 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms