Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH12P55289 RNY1P16-201ENST00000363063 111 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RNU6-595P-201ENST00000363944 107 ntBASIC2.66□□□□□ -1.98
CDH12P55289 SNORA38.1-201ENST00000364172 131 ntBASIC2.66□□□□□ -1.98
CDH12P55289 SNORA9.2-201ENST00000365361 133 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RNA5SP354-201ENST00000391247 136 ntBASIC2.66□□□□□ -1.98
CDH12P55289 SNORA48.7-201ENST00000391302 135 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RNA5SP390-201ENST00000410191 113 ntBASIC2.66□□□□□ -1.98
CDH12P55289 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH12P55289 MRPS18CP6-201ENST00000423587 223 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RPL21P2-201ENST00000440049 481 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH12P55289 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH12P55289 AC012308.1-201ENST00000451232 178 ntBASIC2.66□□□□□ -1.98
CDH12P55289 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 AP001324.2-201ENST00000461163 319 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RPL27AP5-201ENST00000469428 449 ntBASIC2.66□□□□□ -1.98
CDH12P55289 RPL30P12-201ENST00000474666 353 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AL163540.1-201ENST00000485382 386 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
CDH12P55289 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH12P55289 GZMAP1-201ENST00000503054 631 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH12P55289 RAC1P5-201ENST00000512182 576 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH12P55289 AP000889.1-201ENST00000530968 660 ntBASIC2.66□□□□□ -1.98
CDH12P55289 MRPS36P4-201ENST00000534436 298 ntBASIC2.66□□□□□ -1.98
CDH12P55289 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH12P55289 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 SNORA43.4-201ENST00000629559 138 ntBASIC2.66□□□□□ -1.98
CDH12P55289 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH12P55289 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CDH12P55289 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH12P55289 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.65□□□□□ -1.98
CDH12P55289 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CDH12P55289 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.65□□□□□ -1.98
CDH12P55289 Y_RNA.252-201ENST00000364556 101 ntBASIC2.65□□□□□ -1.99
CDH12P55289 RNU6-99P-201ENST00000364721 107 ntBASIC2.65□□□□□ -1.99
CDH12P55289 SNORA22B-201ENST00000383876 138 ntBASIC2.65□□□□□ -1.99
CDH12P55289 MIR147B-201ENST00000390185 80 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH12P55289 AC104332.2-201ENST00000429959 156 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AL035666.1-201ENST00000446195 348 ntBASIC2.65□□□□□ -1.99
CDH12P55289 RPL39P29-201ENST00000447779 157 ntBASIC2.65□□□□□ -1.99
CDH12P55289 BX510359.1-201ENST00000456973 237 ntBASIC2.65□□□□□ -1.99
CDH12P55289 SNRPGP7-201ENST00000469016 106 ntBASIC2.65□□□□□ -1.99
CDH12P55289 RPL17P19-201ENST00000489069 552 ntBASIC2.65□□□□□ -1.99
CDH12P55289 SNORA31.6-201ENST00000516241 130 ntBASIC2.65□□□□□ -1.99
CDH12P55289 RNU6-264P-201ENST00000517134 104 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC107016.2-201ENST00000547968 190 ntBASIC2.65□□□□□ -1.99
CDH12P55289 SUB1P3-201ENST00000564581 315 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH12P55289 MIR5701-3-201ENST00000578890 82 ntBASIC2.65□□□□□ -1.99
CDH12P55289 MIR1254-2-201ENST00000579553 63 ntBASIC2.65□□□□□ -1.99
CDH12P55289 MIR5701-1-201ENST00000585138 82 ntBASIC2.65□□□□□ -1.99
CDH12P55289 RPS15AP11-201ENST00000594193 385 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC078899.3-201ENST00000599065 212 ntBASIC2.65□□□□□ -1.99
CDH12P55289 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC069200.1-201ENST00000609511 323 ntBASIC2.65□□□□□ -1.99
CDH12P55289 MIR5701-2-201ENST00000615634 82 ntBASIC2.65□□□□□ -1.99
CDH12P55289 AC091925.1-201ENST00000623204 462 ntBASIC2.65□□□□□ -1.99
CDH12P55289 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH12P55289 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH12P55289 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH12P55289 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDH12P55289 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDH12P55289 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH12P55289 Y_RNA.28-201ENST00000362554 111 ntBASIC2.64□□□□□ -1.99
CDH12P55289 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
CDH12P55289 AL590004.1-201ENST00000405321 300 ntBASIC2.64□□□□□ -1.99
CDH12P55289 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH12P55289 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
CDH12P55289 AL118496.2-201ENST00000448300 230 ntBASIC2.64□□□□□ -1.99
CDH12P55289 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
CDH12P55289 RPL7P49-201ENST00000471402 708 ntBASIC2.64□□□□□ -1.99
CDH12P55289 RPS27AP9-201ENST00000477681 438 ntBASIC2.64□□□□□ -1.99
CDH12P55289 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH12P55289 MRPS36P2-201ENST00000512569 299 ntBASIC2.64□□□□□ -1.99
CDH12P55289 Y_RNA.661-201ENST00000516003 99 ntBASIC2.64□□□□□ -1.99
CDH12P55289 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
CDH12P55289 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH12P55289 RNU6-91P-201ENST00000607774 107 ntBASIC2.64□□□□□ -1.99
CDH12P55289 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.64□□□□□ -1.99
CDH12P55289 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
CDH12P55289 UCA1.1-201ENST00000620952 75 ntBASIC2.64□□□□□ -1.99
CDH12P55289 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH12P55289 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH12P55289 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CDH12P55289 AL355596.1-201ENST00000565399 3996 ntBASIC2.64□□□□□ -1.99
CDH12P55289 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDH12P55289 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH12P55289 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
CDH12P55289 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH12P55289 RNA5SP374-201ENST00000362939 125 ntBASIC2.63□□□□□ -1.99
CDH12P55289 RNU6-1285P-201ENST00000363480 105 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms