Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-1222P-201ENST00000384615 107 ntBASIC1.65□□□□□ -2.15
CDH4P55283 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
CDH4P55283 GPR143P-201ENST00000434155 205 ntBASIC1.65□□□□□ -2.15
CDH4P55283 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH4P55283 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH4P55283 SNRPGP7-201ENST00000469016 106 ntBASIC1.65□□□□□ -2.15
CDH4P55283 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH4P55283 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH4P55283 RNU5F-2P-201ENST00000516066 82 ntBASIC1.65□□□□□ -2.15
CDH4P55283 SNORD27.1-201ENST00000516319 72 ntBASIC1.65□□□□□ -2.15
CDH4P55283 RNU6-1178P-201ENST00000516674 107 ntBASIC1.65□□□□□ -2.15
CDH4P55283 AL356057.1-201ENST00000533798 831 ntBASIC1.65□□□□□ -2.15
CDH4P55283 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 AC022254.1-201ENST00000567857 235 ntBASIC1.65□□□□□ -2.15
CDH4P55283 MIR4775-201ENST00000581168 75 ntBASIC1.65□□□□□ -2.15
CDH4P55283 AC099842.1-201ENST00000619919 596 ntBASIC1.65□□□□□ -2.15
CDH4P55283 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 U4.7-201ENST00000638126 106 ntBASIC1.65□□□□□ -2.15
CDH4P55283 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH4P55283 RNA5SP432-201ENST00000362480 116 ntBASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-23P-201ENST00000363283 107 ntBASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-282P-201ENST00000365357 103 ntBASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-108P-201ENST00000365558 107 ntBASIC1.64□□□□□ -2.15
CDH4P55283 MIR1-2-201ENST00000384961 85 ntBASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-550P-201ENST00000391057 101 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH4P55283 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH4P55283 VN1R36P-201ENST00000414936 291 ntBASIC1.64□□□□□ -2.15
CDH4P55283 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDH4P55283 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH4P55283 MTND2P4-201ENST00000445034 1004 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC079781.2-201ENST00000446424 169 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC079448.1-201ENST00000449377 373 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH4P55283 AC104136.1-201ENST00000512969 394 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH4P55283 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-237P-201ENST00000515985 71 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC115990.1-201ENST00000526957 301 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AP000654.2-201ENST00000605633 586 ntBASIC1.64□□□□□ -2.15
CDH4P55283 MIR98-201ENST00000606724 119 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC104073.3-201ENST00000610942 955 ntBASIC1.64□□□□□ -2.15
CDH4P55283 AC130454.1-201ENST00000622948 401 ntBASIC1.64□□□□□ -2.15
CDH4P55283 Z69720.2-201ENST00000624755 279 ntBASIC1.64□□□□□ -2.15
CDH4P55283 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDH4P55283 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.64□□□□□ -2.15
CDH4P55283 RNU6-37P-201ENST00000362692 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-1097P-201ENST00000363586 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-11P-201ENST00000364234 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 Y_RNA.324-201ENST00000365165 102 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-25P-201ENST00000383873 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-1-201ENST00000383898 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-48P-201ENST00000384161 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-36P-201ENST00000384172 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-4P-201ENST00000384205 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-5P-201ENST00000384238 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-3P-201ENST00000384314 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-16P-201ENST00000384385 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-15P-201ENST00000384534 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-2-201ENST00000384627 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-29P-201ENST00000384637 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-9-201ENST00000384776 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-33P-201ENST00000384793 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 MIR454-201ENST00000390180 115 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH4P55283 BX295541.1-201ENST00000417774 250 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH4P55283 AL162395.1-201ENST00000457882 422 ntBASIC1.63□□□□□ -2.15
CDH4P55283 BET1P1-201ENST00000482276 359 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-377P-201ENST00000515965 102 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RN7SKP219-201ENST00000516825 296 ntBASIC1.63□□□□□ -2.15
CDH4P55283 TRAV32-201ENST00000553993 340 ntBASIC1.63□□□□□ -2.15
CDH4P55283 MIR3913-1-201ENST00000577744 102 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC245014.2-201ENST00000603689 287 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC246785.4-201ENST00000605374 287 ntBASIC1.63□□□□□ -2.15
CDH4P55283 RNU6-6P-201ENST00000606623 107 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
CDH4P55283 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH4P55283 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CDH4P55283 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDH4P55283 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDH4P55283 RNU6-105P-201ENST00000363909 104 ntBASIC1.62□□□□□ -2.15
CDH4P55283 RNU6-715P-201ENST00000365204 103 ntBASIC1.62□□□□□ -2.15
CDH4P55283 SNORD116-8-201ENST00000384365 95 ntBASIC1.62□□□□□ -2.15
CDH4P55283 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH4P55283 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.62□□□□□ -2.15
CDH4P55283 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH4P55283 MTND1P26-201ENST00000440488 538 ntBASIC1.62□□□□□ -2.15
CDH4P55283 AC244505.5-201ENST00000443639 207 ntBASIC1.62□□□□□ -2.15
CDH4P55283 MIR449C-201ENST00000516047 92 ntBASIC1.62□□□□□ -2.15
CDH4P55283 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
CDH4P55283 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH4P55283 AC007834.2-201ENST00000536310 343 ntBASIC1.62□□□□□ -2.15
CDH4P55283 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms