Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-1-201ENST00000383898 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-42P-201ENST00000384165 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-36P-201ENST00000384172 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-4P-201ENST00000384205 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-5P-201ENST00000384238 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-3P-201ENST00000384314 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-1222P-201ENST00000384615 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-2-201ENST00000384627 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-9-201ENST00000384776 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-33P-201ENST00000384793 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.57□□□□□ -2.16
ACLYP53396 OR6C66P-201ENST00000414917 930 ntBASIC1.57□□□□□ -2.16
ACLYP53396 VN1R36P-201ENST00000414936 291 ntBASIC1.57□□□□□ -2.16
ACLYP53396 Z99497.1-201ENST00000421282 135 ntBASIC1.57□□□□□ -2.16
ACLYP53396 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.57□□□□□ -2.16
ACLYP53396 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
ACLYP53396 AC087884.1-201ENST00000469738 328 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.57□□□□□ -2.16
ACLYP53396 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.57□□□□□ -2.16
ACLYP53396 AC104806.1-201ENST00000508720 308 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC009646.1-201ENST00000510455 318 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.57□□□□□ -2.16
ACLYP53396 Vault.3-201ENST00000516676 95 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.57□□□□□ -2.16
ACLYP53396 RNU6-6P-201ENST00000606623 107 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC024933.1-201ENST00000608472 348 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AC097372.5-201ENST00000623665 376 ntBASIC1.57□□□□□ -2.16
ACLYP53396 Z69720.2-201ENST00000624755 279 ntBASIC1.57□□□□□ -2.16
ACLYP53396 AP000560.1-201ENST00000624150 1937 ntBASIC1.57□□□□□ -2.16
ACLYP53396 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
ACLYP53396 MTND5P17-201ENST00000418405 1603 ntBASIC1.56□□□□□ -2.16
ACLYP53396 SNORA62.1-201ENST00000364287 154 ntBASIC1.56□□□□□ -2.16
ACLYP53396 RNU6-116P-201ENST00000384042 109 ntBASIC1.56□□□□□ -2.16
ACLYP53396 MIR544A-201ENST00000384855 91 ntBASIC1.56□□□□□ -2.16
ACLYP53396 CYCSP33-201ENST00000414485 327 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.56□□□□□ -2.16
ACLYP53396 HIGD1AP15-201ENST00000416198 280 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.56□□□□□ -2.16
ACLYP53396 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.56□□□□□ -2.16
ACLYP53396 AC073614.1-201ENST00000438690 650 ntBASIC1.56□□□□□ -2.16
ACLYP53396 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
ACLYP53396 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
ACLYP53396 RNU6-1129P-201ENST00000515964 104 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.56□□□□□ -2.16
ACLYP53396 AC090572.1-201ENST00000519251 160 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC090616.2-202ENST00000584248 222 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AL078603.1-201ENST00000603824 313 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC090578.1-201ENST00000604955 591 ntBASIC1.56□□□□□ -2.16
ACLYP53396 AC092354.1-201ENST00000606057 376 ntBASIC1.56□□□□□ -2.16
ACLYP53396 RMST_2.1-201ENST00000617263 136 ntBASIC1.56□□□□□ -2.16
ACLYP53396 U4.7-201ENST00000638126 106 ntBASIC1.56□□□□□ -2.16
ACLYP53396 MTND4P4-201ENST00000439033 1366 ntBASIC1.56□□□□□ -2.16
ACLYP53396 OR4G1P-203ENST00000641984 1631 ntBASIC1.55□□□□□ -2.16
ACLYP53396 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
ACLYP53396 U8.3-201ENST00000363321 132 ntBASIC1.55□□□□□ -2.16
ACLYP53396 Y_RNA.367-201ENST00000365544 101 ntBASIC1.55□□□□□ -2.16
ACLYP53396 RNU6-45P-201ENST00000384471 107 ntBASIC1.55□□□□□ -2.16
ACLYP53396 SNORA48.1-201ENST00000390879 135 ntBASIC1.55□□□□□ -2.16
ACLYP53396 SNORD56-201ENST00000413522 71 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AC013410.2-201ENST00000422627 201 ntBASIC1.55□□□□□ -2.16
ACLYP53396 MTND5P25-201ENST00000430499 799 ntBASIC1.55□□□□□ -2.16
ACLYP53396 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.55□□□□□ -2.16
ACLYP53396 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.55□□□□□ -2.16
ACLYP53396 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.55□□□□□ -2.16
ACLYP53396 AC074344.1-201ENST00000512823 224 ntBASIC1.55□□□□□ -2.16
ACLYP53396 RNU5F-2P-201ENST00000516066 82 ntBASIC1.55□□□□□ -2.16
ACLYP53396 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
ACLYP53396 RN7SKP265-201ENST00000516448 223 ntBASIC1.55□□□□□ -2.16
ACLYP53396 RNU6-410P-201ENST00000517006 107 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AC115990.1-201ENST00000526957 301 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AP005435.4-201ENST00000529514 284 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
ACLYP53396 MIR548AB-201ENST00000584917 84 ntBASIC1.55□□□□□ -2.16
ACLYP53396 AP000654.2-201ENST00000605633 586 ntBASIC1.55□□□□□ -2.16
ACLYP53396 U6.114-201ENST00000636407 96 ntBASIC1.55□□□□□ -2.16
ACLYP53396 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
ACLYP53396 CBX3P1-201ENST00000325243 554 ntBASIC1.54□□□□□ -2.16
ACLYP53396 RNU6-105P-201ENST00000363909 104 ntBASIC1.54□□□□□ -2.16
ACLYP53396 RNU6-160P-201ENST00000384591 107 ntBASIC1.54□□□□□ -2.16
ACLYP53396 RNU6-550P-201ENST00000391057 101 ntBASIC1.54□□□□□ -2.16
ACLYP53396 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ACLYP53396 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AL035666.1-201ENST00000446195 348 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AC104136.1-201ENST00000512969 394 ntBASIC1.54□□□□□ -2.16
ACLYP53396 RNA5SP220-201ENST00000516298 104 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
ACLYP53396 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AC087883.1-201ENST00000551882 391 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AC009094.1-201ENST00000564443 426 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.54□□□□□ -2.16
ACLYP53396 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
ACLYP53396 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.54□□□□□ -2.16
ACLYP53396 AC018889.1-201ENST00000605372 397 ntBASIC1.54□□□□□ -2.16
ACLYP53396 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ACLYP53396 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ACLYP53396 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ACLYP53396 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms