Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MTCO3P5-201ENST00000433620 714 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH6P52701 MTCYBP1-201ENST00000454315 1119 ntBASIC1.78□□□□□ -2.12
MSH6P52701 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.78□□□□□ -2.12
MSH6P52701 SNRPFP3-201ENST00000457792 225 ntBASIC1.78□□□□□ -2.12
MSH6P52701 RNA5SP269-201ENST00000459032 137 ntBASIC1.78□□□□□ -2.12
MSH6P52701 FO393415.2-201ENST00000480085 343 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH6P52701 RNU1-86P-201ENST00000516108 154 ntBASIC1.78□□□□□ -2.12
MSH6P52701 Y_RNA.687-201ENST00000516558 91 ntBASIC1.78□□□□□ -2.12
MSH6P52701 RNU1-107P-201ENST00000516617 154 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.78□□□□□ -2.12
MSH6P52701 RPL30P11-203ENST00000598995 310 ntBASIC1.78□□□□□ -2.12
MSH6P52701 BNIP3P30-201ENST00000601184 574 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AC098614.4-201ENST00000607601 462 ntBASIC1.78□□□□□ -2.12
MSH6P52701 RMST_7.1-201ENST00000621935 268 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AC095038.3-201ENST00000634439 195 ntBASIC1.78□□□□□ -2.12
MSH6P52701 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.77□□□□□ -2.13
MSH6P52701 RNU6-529P-201ENST00000363383 104 ntBASIC1.77□□□□□ -2.13
MSH6P52701 RNU6-297P-201ENST00000384636 107 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AL049545.1-201ENST00000401856 572 ntBASIC1.77□□□□□ -2.13
MSH6P52701 RNA5SP390-201ENST00000410191 113 ntBASIC1.77□□□□□ -2.13
MSH6P52701 RNU6-195P-201ENST00000411352 109 ntBASIC1.77□□□□□ -2.13
MSH6P52701 UBE2V1P10-201ENST00000414685 269 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AC138623.1-201ENST00000418060 216 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.77□□□□□ -2.13
MSH6P52701 AC091965.2-201ENST00000512324 613 ntBASIC1.77□□□□□ -2.13
MSH6P52701 SNORA43.2-201ENST00000516652 128 ntBASIC1.77□□□□□ -2.13
MSH6P52701 SNORA48.11-201ENST00000517015 89 ntBASIC1.77□□□□□ -2.13
MSH6P52701 SNORA31.25-201ENST00000517242 134 ntBASIC1.77□□□□□ -2.13
MSH6P52701 RNU2-19P-201ENST00000517288 84 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
MSH6P52701 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AC012414.6-201ENST00000568241 401 ntBASIC1.77□□□□□ -2.13
MSH6P52701 MTCYBP33-201ENST00000575007 1130 ntBASIC1.77□□□□□ -2.13
MSH6P52701 MIR5692A1-201ENST00000580523 69 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AC093788.1-201ENST00000609356 927 ntBASIC1.77□□□□□ -2.13
MSH6P52701 AC063944.3-201ENST00000609969 533 ntBASIC1.77□□□□□ -2.13
MSH6P52701 uc_338.15-201ENST00000615470 191 ntBASIC1.77□□□□□ -2.13
MSH6P52701 SCARNA4-202ENST00000625402 129 ntBASIC1.77□□□□□ -2.13
MSH6P52701 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.77□□□□□ -2.13
MSH6P52701 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MSH6P52701 RNU4-91P-201ENST00000364778 135 ntBASIC1.76□□□□□ -2.13
MSH6P52701 RNU6-74P-201ENST00000384235 107 ntBASIC1.76□□□□□ -2.13
MSH6P52701 SNORA26.8-201ENST00000391306 124 ntBASIC1.76□□□□□ -2.13
MSH6P52701 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MSH6P52701 SNORD56-201ENST00000413522 71 ntBASIC1.76□□□□□ -2.13
MSH6P52701 EDDM3CP-201ENST00000415977 425 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.76□□□□□ -2.13
MSH6P52701 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.76□□□□□ -2.13
MSH6P52701 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH6P52701 AL022238.1-201ENST00000442557 355 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AC079781.2-201ENST00000446424 169 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH6P52701 AC018868.1-201ENST00000491307 315 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AC010486.2-201ENST00000505572 483 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AC104806.1-201ENST00000508720 308 ntBASIC1.76□□□□□ -2.13
MSH6P52701 RNA5SP436-201ENST00000516020 115 ntBASIC1.76□□□□□ -2.13
MSH6P52701 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH6P52701 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.76□□□□□ -2.13
MSH6P52701 AC068338.1-201ENST00000565567 176 ntBASIC1.76□□□□□ -2.13
MSH6P52701 RMST_4.1-201ENST00000616886 107 ntBASIC1.76□□□□□ -2.13
MSH6P52701 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.76□□□□□ -2.13
MSH6P52701 AC011155.2-201ENST00000623202 216 ntBASIC1.76□□□□□ -2.13
MSH6P52701 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
MSH6P52701 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.75□□□□□ -2.13
MSH6P52701 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
MSH6P52701 SNORD116-20-201ENST00000384529 92 ntBASIC1.75□□□□□ -2.13
MSH6P52701 MIR186-201ENST00000384988 86 ntBASIC1.75□□□□□ -2.13
MSH6P52701 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.75□□□□□ -2.13
MSH6P52701 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.75□□□□□ -2.13
MSH6P52701 AC000111.3-201ENST00000433478 193 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC012308.1-201ENST00000451232 178 ntBASIC1.75□□□□□ -2.13
MSH6P52701 RNU2-53P-201ENST00000516257 147 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC060788.1-201ENST00000521318 469 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH6P52701 DUXAP5-201ENST00000529668 529 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH6P52701 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.75□□□□□ -2.13
MSH6P52701 AC233702.2-202ENST00000562547 291 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC145350.1-201ENST00000567426 208 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC137800.2-201ENST00000574375 120 ntBASIC1.75□□□□□ -2.13
MSH6P52701 MIR4775-201ENST00000581168 75 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC073410.2-201ENST00000603240 332 ntBASIC1.75□□□□□ -2.13
MSH6P52701 AC091931.1-201ENST00000623488 728 ntBASIC1.75□□□□□ -2.13
MSH6P52701 OR4G2P-201ENST00000328113 903 ntBASIC1.74□□□□□ -2.13
MSH6P52701 FGF7P2-201ENST00000332473 296 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU6-1097P-201ENST00000363586 107 ntBASIC1.74□□□□□ -2.13
MSH6P52701 SNORA25B-201ENST00000365507 128 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU6-108P-201ENST00000365558 107 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNY3P10-201ENST00000384764 102 ntBASIC1.74□□□□□ -2.13
MSH6P52701 MIR625-201ENST00000385047 85 ntBASIC1.74□□□□□ -2.13
MSH6P52701 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU1-139P-201ENST00000391307 165 ntBASIC1.74□□□□□ -2.13
MSH6P52701 AL591034.2-201ENST00000402839 359 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RAP1BP3-201ENST00000407180 549 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU2-3P-201ENST00000410144 191 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU6-248P-201ENST00000410720 107 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU6-607P-201ENST00000411283 108 ntBASIC1.74□□□□□ -2.13
MSH6P52701 OR6C66P-201ENST00000414917 930 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms