Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL117336.2-201ENST00000602435 335 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 C8orf59P2-201ENST00000603441 271 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
HNF4AP41235 HAUS6P2-201ENST00000433254 2404 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HNF4AP41235 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RBBP8P1-201ENST00000449447 1844 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 Y_RNA.184-201ENST00000363884 108 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 SNORD14B-201ENST00000364533 90 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 RNU6-72P-201ENST00000384285 79 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 Y_RNA.529-201ENST00000384586 119 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 MIR95-201ENST00000385072 81 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 MIR23A-201ENST00000385245 73 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
HNF4AP41235 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.43□□□□□ -2.02
HNF4AP41235 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.43□□□□□ -2.02
HNF4AP41235 RNU6-864P-201ENST00000516256 108 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.43□□□□□ -2.02
HNF4AP41235 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.43□□□□□ -2.02
HNF4AP41235 LRRC37A5P-203ENST00000580181 585 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 MIR3941-201ENST00000582572 103 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 AC073410.2-201ENST00000603240 332 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 AL713866.2-201ENST00000603579 219 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HNF4AP41235 FAM157A-202ENST00000615155 405 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 SCARNA4-202ENST00000625402 129 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 AC112487.2-201ENST00000637950 304 ntBASIC2.43□□□□□ -2.02
HNF4AP41235 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HNF4AP41235 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HNF4AP41235 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
HNF4AP41235 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HNF4AP41235 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
HNF4AP41235 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HNF4AP41235 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-1010P-201ENST00000362757 107 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 SNORD113-7-201ENST00000363762 77 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-266P-201ENST00000364225 107 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-487P-201ENST00000365430 104 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-843P-201ENST00000384454 104 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU1-57P-201ENST00000384491 166 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 MIR10A-201ENST00000385043 110 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 MIR450B-201ENST00000401182 78 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.42□□□□□ -2.02
HNF4AP41235 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.42□□□□□ -2.02
HNF4AP41235 AC093019.1-201ENST00000443135 252 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 PPP1R2P5-201ENST00000457256 603 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 AC006026.2-201ENST00000457376 180 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.42□□□□□ -2.02
HNF4AP41235 SNORA19.2-201ENST00000516013 114 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-256P-201ENST00000516747 97 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 RNU6-273P-201ENST00000516937 96 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.42□□□□□ -2.02
HNF4AP41235 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.42□□□□□ -2.02
HNF4AP41235 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.42□□□□□ -2.02
HNF4AP41235 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.42□□□□□ -2.02
HNF4AP41235 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.42□□□□□ -2.02
HNF4AP41235 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HNF4AP41235 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 SCARNA15.3-201ENST00000626315 122 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 SCARNA4.1-201ENST00000628597 123 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 AC099654.5-201ENST00000636479 350 ntBASIC2.42□□□□□ -2.02
HNF4AP41235 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HNF4AP41235 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HNF4AP41235 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
HNF4AP41235 AL136360.1-201ENST00000503377 1900 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.41□□□□□ -2.02
HNF4AP41235 RNU6-797P-201ENST00000363101 109 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 Y_RNA.324-201ENST00000365165 102 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 Y_RNA.356-201ENST00000365475 113 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HNF4AP41235 Y_RNA.480-201ENST00000384364 102 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 MIR561-201ENST00000385216 97 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AL355497.1-201ENST00000406262 551 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 VN1R36P-201ENST00000414936 291 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AL365400.1-201ENST00000431854 640 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 HMGB1P18-201ENST00000438801 619 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 IPO7P1-201ENST00000442031 636 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.41□□□□□ -2.02
HNF4AP41235 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.41□□□□□ -2.02
HNF4AP41235 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 AMD1P1-201ENST00000457220 922 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.41□□□□□ -2.02
HNF4AP41235 CYCSP27-201ENST00000527643 293 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.41□□□□□ -2.02
HNF4AP41235 AC078899.2-201ENST00000595282 212 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 RMST_4.1-201ENST00000616886 107 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 TPTEP1-208ENST00000636884 213 ntBASIC2.41□□□□□ -2.02
HNF4AP41235 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
HNF4AP41235 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HNF4AP41235 RNA5SP68-201ENST00000363885 119 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms