Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
RFC3P40938 SNRPFP4-201ENST00000456366 242 ntBASIC1.38□□□□□ -2.19
RFC3P40938 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC3P40938 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
RFC3P40938 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC3P40938 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC3P40938 AC090578.1-201ENST00000604955 591 ntBASIC1.38□□□□□ -2.19
RFC3P40938 AC027449.1-201ENST00000608890 407 ntBASIC1.38□□□□□ -2.19
RFC3P40938 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
RFC3P40938 AC097372.5-201ENST00000623665 376 ntBASIC1.38□□□□□ -2.19
RFC3P40938 AC008993.2-201ENST00000631744 806 ntBASIC1.38□□□□□ -2.19
RFC3P40938 MTND5P10-201ENST00000603719 1809 ntBASIC1.38□□□□□ -2.19
RFC3P40938 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RFC3P40938 AC233981.2-201ENST00000611524 1614 ntBASIC1.37□□□□□ -2.19
RFC3P40938 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
RFC3P40938 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
RFC3P40938 SNORD114-6-201ENST00000364393 72 ntBASIC1.37□□□□□ -2.19
RFC3P40938 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
RFC3P40938 RNU6-550P-201ENST00000391057 101 ntBASIC1.37□□□□□ -2.19
RFC3P40938 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.37□□□□□ -2.19
RFC3P40938 AC243964.1-201ENST00000441814 261 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AMD1P1-201ENST00000457220 922 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
RFC3P40938 MTND3P5-201ENST00000512798 333 ntBASIC1.37□□□□□ -2.19
RFC3P40938 RNU6-1129P-201ENST00000515964 104 ntBASIC1.37□□□□□ -2.19
RFC3P40938 RNU6-410P-201ENST00000517006 107 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.37□□□□□ -2.19
RFC3P40938 AP003072.2-201ENST00000527756 676 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC087883.1-201ENST00000551882 391 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.37□□□□□ -2.19
RFC3P40938 SUB1P4-201ENST00000566062 339 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.37□□□□□ -2.19
RFC3P40938 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC3P40938 MIR3136-201ENST00000583498 78 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC008752.3-201ENST00000588113 712 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AL034555.1-201ENST00000604816 211 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC104073.3-201ENST00000610942 955 ntBASIC1.37□□□□□ -2.19
RFC3P40938 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RFC3P40938 AL590240.4-201ENST00000616908 390 ntBASIC1.37□□□□□ -2.19
RFC3P40938 AC011155.2-201ENST00000623202 216 ntBASIC1.37□□□□□ -2.19
RFC3P40938 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC3P40938 U6.114-201ENST00000636407 96 ntBASIC1.37□□□□□ -2.19
RFC3P40938 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RFC3P40938 Y_RNA.238-201ENST00000364441 102 ntBASIC1.36□□□□□ -2.19
RFC3P40938 Y_RNA.324-201ENST00000365165 102 ntBASIC1.36□□□□□ -2.19
RFC3P40938 Y_RNA.332-201ENST00000365271 113 ntBASIC1.36□□□□□ -2.19
RFC3P40938 Y_RNA.367-201ENST00000365544 101 ntBASIC1.36□□□□□ -2.19
RFC3P40938 RNU6-142P-201ENST00000384019 107 ntBASIC1.36□□□□□ -2.19
RFC3P40938 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RFC3P40938 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
RFC3P40938 RPS3AP3-201ENST00000411933 242 ntBASIC1.36□□□□□ -2.19
RFC3P40938 NCOR1P3-201ENST00000420479 303 ntBASIC1.36□□□□□ -2.19
RFC3P40938 MTND5P25-201ENST00000430499 799 ntBASIC1.36□□□□□ -2.19
RFC3P40938 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.36□□□□□ -2.19
RFC3P40938 AC079781.2-201ENST00000446424 169 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC079448.1-201ENST00000449377 373 ntBASIC1.36□□□□□ -2.19
RFC3P40938 HMGN2P18-201ENST00000450680 270 ntBASIC1.36□□□□□ -2.19
RFC3P40938 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.36□□□□□ -2.19
RFC3P40938 RNU1-131P-201ENST00000458943 161 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.36□□□□□ -2.19
RFC3P40938 RNU6-377P-201ENST00000515965 102 ntBASIC1.36□□□□□ -2.19
RFC3P40938 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
RFC3P40938 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AP001893.2-201ENST00000526949 202 ntBASIC1.36□□□□□ -2.19
RFC3P40938 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.36□□□□□ -2.19
RFC3P40938 MIR3682-201ENST00000581338 84 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC090616.2-202ENST00000584248 222 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC098848.2-201ENST00000588023 330 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC005786.1-201ENST00000588553 154 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.36□□□□□ -2.19
RFC3P40938 BNIP3P8-201ENST00000597863 560 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC123912.5-201ENST00000605470 343 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AL359821.1-201ENST00000605519 182 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC092354.1-201ENST00000606057 376 ntBASIC1.36□□□□□ -2.19
RFC3P40938 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
RFC3P40938 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.36□□□□□ -2.19
RFC3P40938 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
RFC3P40938 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RFC3P40938 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
RFC3P40938 AP000560.1-201ENST00000624150 1937 ntBASIC1.35□□□□□ -2.19
RFC3P40938 RNU6-1287P-201ENST00000362914 107 ntBASIC1.35□□□□□ -2.19
RFC3P40938 RNU6-1060P-201ENST00000384664 107 ntBASIC1.35□□□□□ -2.19
RFC3P40938 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC3P40938 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC3P40938 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC3P40938 MTCYBP1-201ENST00000454315 1119 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC010409.1-201ENST00000487382 476 ntBASIC1.35□□□□□ -2.19
RFC3P40938 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC3P40938 TRMT112P2-201ENST00000512910 132 ntBASIC1.35□□□□□ -2.19
RFC3P40938 MIR449C-201ENST00000516047 92 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC109479.2-201ENST00000517842 174 ntBASIC1.35□□□□□ -2.19
RFC3P40938 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.35□□□□□ -2.19
RFC3P40938 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms