Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.62□□□□□ -1.83
LTBRP36941 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
LTBRP36941 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.62□□□□□ -1.83
LTBRP36941 AC027288.2-201ENST00000553028 243 ntBASIC3.62□□□□□ -1.83
LTBRP36941 MIR4276-201ENST00000584832 70 ntBASIC3.62□□□□□ -1.83
LTBRP36941 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
LTBRP36941 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LTBRP36941 AC006023.1-201ENST00000603944 259 ntBASIC3.62□□□□□ -1.83
LTBRP36941 AC012531.5-201ENST00000611375 151 ntBASIC3.62□□□□□ -1.83
LTBRP36941 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.62□□□□□ -1.83
LTBRP36941 AL450472.1-202ENST00000637286 180 ntBASIC3.62□□□□□ -1.83
LTBRP36941 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LTBRP36941 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LTBRP36941 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LTBRP36941 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LTBRP36941 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LTBRP36941 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 RNA5SP361-201ENST00000362686 118 ntBASIC3.61□□□□□ -1.83
LTBRP36941 Y_RNA.237-201ENST00000364439 102 ntBASIC3.61□□□□□ -1.83
LTBRP36941 Y_RNA.478-201ENST00000384358 107 ntBASIC3.61□□□□□ -1.83
LTBRP36941 MIR487A-201ENST00000385009 80 ntBASIC3.61□□□□□ -1.83
LTBRP36941 RNU2-49P-201ENST00000410666 184 ntBASIC3.61□□□□□ -1.83
LTBRP36941 RNA5SP38-201ENST00000410750 119 ntBASIC3.61□□□□□ -1.83
LTBRP36941 RNA5SP104-201ENST00000410989 118 ntBASIC3.61□□□□□ -1.83
LTBRP36941 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AC096638.1-201ENST00000444678 216 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.61□□□□□ -1.83
LTBRP36941 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
LTBRP36941 snoU13.6-201ENST00000458785 104 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AC107626.1-201ENST00000471084 183 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.61□□□□□ -1.83
LTBRP36941 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBRP36941 FCF1P8-201ENST00000510322 597 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
LTBRP36941 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 AC021231.3-201ENST00000558497 370 ntBASIC3.61□□□□□ -1.83
LTBRP36941 MIR5695-201ENST00000579717 85 ntBASIC3.61□□□□□ -1.83
LTBRP36941 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AC005296.1-201ENST00000616145 209 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AL138880.2-201ENST00000616214 239 ntBASIC3.61□□□□□ -1.83
LTBRP36941 AC141273.2-201ENST00000618989 130 ntBASIC3.61□□□□□ -1.83
LTBRP36941 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
LTBRP36941 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.61□□□□□ -1.83
LTBRP36941 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LTBRP36941 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LTBRP36941 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
LTBRP36941 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBRP36941 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 MIR422A-201ENST00000362286 90 ntBASIC3.6□□□□□ -1.83
LTBRP36941 RNU6-1159P-201ENST00000362933 107 ntBASIC3.6□□□□□ -1.83
LTBRP36941 MIR10B-201ENST00000385011 110 ntBASIC3.6□□□□□ -1.83
LTBRP36941 RNA5SP213-201ENST00000391031 106 ntBASIC3.6□□□□□ -1.83
LTBRP36941 RNU4-47P-201ENST00000410876 114 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AC009310.1-201ENST00000414414 451 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AL445305.1-201ENST00000432577 575 ntBASIC3.6□□□□□ -1.83
LTBRP36941 RNU7-23P-201ENST00000459465 62 ntBASIC3.6□□□□□ -1.83
LTBRP36941 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBRP36941 RNU6-579P-201ENST00000516879 102 ntBASIC3.6□□□□□ -1.83
LTBRP36941 DEFB108E-201ENST00000524692 240 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBRP36941 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBRP36941 UBL5P4-201ENST00000562584 236 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBRP36941 RPL12P50-201ENST00000603116 116 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AL138963.2-201ENST00000605137 226 ntBASIC3.6□□□□□ -1.83
LTBRP36941 AC012603.1-201ENST00000606424 528 ntBASIC3.6□□□□□ -1.83
LTBRP36941 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.6□□□□□ -1.83
LTBRP36941 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBRP36941 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBRP36941 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBRP36941 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBRP36941 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LTBRP36941 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.83
LTBRP36941 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LTBRP36941 AL391987.6-201ENST00000305671 199 ntBASIC3.59□□□□□ -1.83
LTBRP36941 RNU6-1285P-201ENST00000363480 105 ntBASIC3.59□□□□□ -1.83
LTBRP36941 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
LTBRP36941 RNU6-937P-201ENST00000384325 106 ntBASIC3.59□□□□□ -1.83
LTBRP36941 Y_RNA.515-201ENST00000384535 112 ntBASIC3.59□□□□□ -1.83
LTBRP36941 RNU6-19P-201ENST00000384718 107 ntBASIC3.59□□□□□ -1.83
LTBRP36941 RNU6-159P-201ENST00000391080 106 ntBASIC3.59□□□□□ -1.83
LTBRP36941 MRPL35P1-201ENST00000404272 572 ntBASIC3.59□□□□□ -1.83
LTBRP36941 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
LTBRP36941 MIR548H3-201ENST00000408771 118 ntBASIC3.59□□□□□ -1.83
LTBRP36941 Y_RNA.602-201ENST00000410535 92 ntBASIC3.59□□□□□ -1.83
LTBRP36941 AC245291.1-201ENST00000419501 328 ntBASIC3.59□□□□□ -1.83
LTBRP36941 PTGES3P4-201ENST00000426243 356 ntBASIC3.59□□□□□ -1.83
LTBRP36941 WARS2P1-201ENST00000429678 537 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms