Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNU6-325P-201ENST00000411132 105 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AC011816.1-201ENST00000441346 546 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.98□□□□□ -1.93
CIITAP33076 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AL118496.2-201ENST00000448300 230 ntBASIC2.98□□□□□ -1.93
CIITAP33076 RPL30P15-201ENST00000457129 321 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.98□□□□□ -1.93
CIITAP33076 Y_RNA.653-201ENST00000459091 95 ntBASIC2.98□□□□□ -1.93
CIITAP33076 RPL31P41-201ENST00000477967 372 ntBASIC2.98□□□□□ -1.93
CIITAP33076 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.98□□□□□ -1.93
CIITAP33076 AC097473.1-201ENST00000508142 408 ntBASIC2.98□□□□□ -1.93
CIITAP33076 RNA5SP76-201ENST00000516277 87 ntBASIC2.98□□□□□ -1.93
CIITAP33076 RNA5SP384-201ENST00000516615 116 ntBASIC2.98□□□□□ -1.93
CIITAP33076 RNU1-54P-201ENST00000517181 120 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.98□□□□□ -1.93
CIITAP33076 LINC00933-203ENST00000559812 219 ntBASIC2.98□□□□□ -1.93
CIITAP33076 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.98□□□□□ -1.93
CIITAP33076 MIR4635-201ENST00000583759 79 ntBASIC2.98□□□□□ -1.93
CIITAP33076 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.98□□□□□ -1.93
CIITAP33076 AC008121.1-201ENST00000603244 268 ntBASIC2.98□□□□□ -1.93
CIITAP33076 AC006023.1-201ENST00000603944 259 ntBASIC2.98□□□□□ -1.93
CIITAP33076 MIR6852-201ENST00000621699 66 ntBASIC2.98□□□□□ -1.93
CIITAP33076 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CIITAP33076 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CIITAP33076 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.97□□□□□ -1.93
CIITAP33076 Y_RNA.31-201ENST00000362574 102 ntBASIC2.97□□□□□ -1.93
CIITAP33076 Y_RNA.128-201ENST00000363391 112 ntBASIC2.97□□□□□ -1.93
CIITAP33076 Y_RNA.216-201ENST00000364205 93 ntBASIC2.97□□□□□ -1.93
CIITAP33076 RNU1-100P-201ENST00000365255 165 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AL513477.1-202ENST00000417061 214 ntBASIC2.97□□□□□ -1.93
CIITAP33076 BPY2DP-201ENST00000422208 265 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AL133396.1-201ENST00000432048 687 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AL137792.2-201ENST00000443484 235 ntBASIC2.97□□□□□ -1.93
CIITAP33076 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
CIITAP33076 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
CIITAP33076 UBE2DNL-203ENST00000474922 222 ntBASIC2.97□□□□□ -1.93
CIITAP33076 RPL23AP94-201ENST00000512518 302 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
CIITAP33076 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.97□□□□□ -1.93
CIITAP33076 RNU6-1170P-201ENST00000515974 106 ntBASIC2.97□□□□□ -1.93
CIITAP33076 Y_RNA.708-201ENST00000516950 96 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AC026241.1-201ENST00000517873 2142 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AC103996.1-201ENST00000555468 102 ntBASIC2.97□□□□□ -1.93
CIITAP33076 MIR3171-201ENST00000584270 74 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AP000787.2-201ENST00000604432 568 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AC019193.3-201ENST00000609144 554 ntBASIC2.97□□□□□ -1.93
CIITAP33076 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.97□□□□□ -1.93
CIITAP33076 uc_338.22-201ENST00000622722 187 ntBASIC2.97□□□□□ -1.93
CIITAP33076 MIR3199-2-201ENST00000636243 86 ntBASIC2.97□□□□□ -1.93
CIITAP33076 U4.7-201ENST00000638126 106 ntBASIC2.97□□□□□ -1.93
CIITAP33076 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.97□□□□□ -1.93
CIITAP33076 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CIITAP33076 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
CIITAP33076 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CIITAP33076 Y_RNA.146-201ENST00000363549 102 ntBASIC2.96□□□□□ -1.94
CIITAP33076 RNU6-890P-201ENST00000384121 107 ntBASIC2.96□□□□□ -1.94
CIITAP33076 RNU6-331P-201ENST00000384724 107 ntBASIC2.96□□□□□ -1.94
CIITAP33076 MIR548P-201ENST00000408336 84 ntBASIC2.96□□□□□ -1.94
CIITAP33076 U3.37-201ENST00000408528 213 ntBASIC2.96□□□□□ -1.94
CIITAP33076 RPL19P1-201ENST00000411635 428 ntBASIC2.96□□□□□ -1.94
CIITAP33076 AC243428.1-201ENST00000421099 264 ntBASIC2.96□□□□□ -1.94
CIITAP33076 AC009414.1-201ENST00000427200 443 ntBASIC2.96□□□□□ -1.94
CIITAP33076 ARL5AP4-201ENST00000430731 512 ntBASIC2.96□□□□□ -1.94
CIITAP33076 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.96□□□□□ -1.94
CIITAP33076 AL031274.1-201ENST00000450334 232 ntBASIC2.96□□□□□ -1.94
CIITAP33076 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
CIITAP33076 RN7SL297P-201ENST00000483161 293 ntBASIC2.96□□□□□ -1.94
CIITAP33076 AC018437.1-201ENST00000492214 406 ntBASIC2.96□□□□□ -1.94
CIITAP33076 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.96□□□□□ -1.94
CIITAP33076 RNU6-120P-201ENST00000516077 103 ntBASIC2.96□□□□□ -1.94
CIITAP33076 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.96□□□□□ -1.94
CIITAP33076 MIR6134-201ENST00000617606 109 ntBASIC2.96□□□□□ -1.94
CIITAP33076 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.96□□□□□ -1.94
CIITAP33076 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CIITAP33076 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CIITAP33076 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CIITAP33076 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.5-201ENST00000362334 102 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-1115P-201ENST00000362490 106 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-78P-201ENST00000362897 107 ntBASIC2.95□□□□□ -1.94
CIITAP33076 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-1317P-201ENST00000364582 104 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-750P-201ENST00000390946 107 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-174P-201ENST00000410406 106 ntBASIC2.95□□□□□ -1.94
CIITAP33076 AC023141.4-201ENST00000412031 328 ntBASIC2.95□□□□□ -1.94
CIITAP33076 PMCHL1-202ENST00000423102 261 ntBASIC2.95□□□□□ -1.94
CIITAP33076 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CIITAP33076 PCMTD1P1-201ENST00000455560 355 ntBASIC2.95□□□□□ -1.94
CIITAP33076 RNU6-1037P-201ENST00000459571 107 ntBASIC2.95□□□□□ -1.94
CIITAP33076 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.95□□□□□ -1.94
CIITAP33076 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.95□□□□□ -1.94
CIITAP33076 SNORD19.2-201ENST00000516978 73 ntBASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.711-201ENST00000516993 102 ntBASIC2.95□□□□□ -1.94
CIITAP33076 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.95□□□□□ -1.94
CIITAP33076 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.95□□□□□ -1.94
CIITAP33076 AC009314.1-201ENST00000603871 304 ntBASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.812-201ENST00000610788 101 ntBASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.784-201ENST00000613803 101 ntBASIC2.95□□□□□ -1.94
CIITAP33076 Y_RNA.787-201ENST00000616522 101 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms