Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.16□□□□□ -2.44
CLIP1P30622 AC022861.1-201ENST00000522981 663 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC018630.3-201ENST00000542637 96 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.16□□□□□ -2.44
CLIP1P30622 BNIP3P6-201ENST00000549284 499 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC093012.1-202ENST00000549403 582 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.16□□□□□ -2.44
CLIP1P30622 AC126365.2-201ENST00000580630 379 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AL031281.1-201ENST00000604049 488 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC079610.2-201ENST00000604818 690 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AC004853.1-201ENST00000604902 698 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 SNORA80D-201ENST00000384488 135 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 RNA5SP219-201ENST00000390940 113 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AL355796.1-201ENST00000406706 323 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 RNA5SP222-201ENST00000411039 105 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.17□□□□□ -2.44
CLIP1P30622 snoU13.27-201ENST00000459278 104 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AC104982.1-201ENST00000478775 574 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 MTND1P3-201ENST00000484956 952 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AC008628.1-201ENST00000508663 265 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AC007834.2-201ENST00000536310 343 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 EIF1P4-201ENST00000572664 335 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.17□□□□□ -2.44
CLIP1P30622 AL158211.4-201ENST00000606988 584 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 AC010133.1-201ENST00000615809 842 ntBASIC-0.17□□□□□ -2.44
CLIP1P30622 U8.7-201ENST00000364940 136 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 RNU6-950P-201ENST00000384651 107 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 CALM2P3-201ENST00000400429 449 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 AC138623.1-201ENST00000418060 216 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.18□□□□□ -2.44
CLIP1P30622 AC244098.3-201ENST00000424803 96 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.18□□□□□ -2.44
CLIP1P30622 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 RN7SKP256-201ENST00000517201 314 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.18□□□□□ -2.44
CLIP1P30622 AC093788.1-201ENST00000609356 927 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 AC021506.2-201ENST00000612354 169 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 AC073349.3-201ENST00000617616 186 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.18□□□□□ -2.44
CLIP1P30622 AC093648.1-201ENST00000623546 606 ntBASIC-0.18□□□□□ -2.44
CLIP1P30622 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CLIP1P30622 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.18□□□□□ -2.44
CLIP1P30622 SNORA63D-201ENST00000364359 132 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 SNORD114-9-201ENST00000364370 72 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
CLIP1P30622 TAF13P2-201ENST00000416876 286 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 AC019178.2-201ENST00000423595 505 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 FABP5P4-201ENST00000437203 171 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 SNRPGP12-201ENST00000449481 213 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.19□□□□□ -2.44
CLIP1P30622 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.19□□□□□ -2.44
CLIP1P30622 MTND1P22-201ENST00000510572 951 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.19□□□□□ -2.44
CLIP1P30622 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
CLIP1P30622 AC011195.1-201ENST00000578177 177 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 MIR3976-201ENST00000606807 139 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 AL133445.2-201ENST00000611191 527 ntBASIC-0.19□□□□□ -2.44
CLIP1P30622 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CLIP1P30622 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RNU6-514P-201ENST00000384208 107 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RAP1BP3-201ENST00000407180 549 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RAC1P8-201ENST00000427086 527 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.2□□□□□ -2.44
CLIP1P30622 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RNU1-131P-201ENST00000458943 161 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RPL39P38-201ENST00000467018 153 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.2□□□□□ -2.44
CLIP1P30622 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.2□□□□□ -2.44
CLIP1P30622 AC090888.2-201ENST00000559765 1144 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 VN1R88P-201ENST00000596787 292 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 RNU6-87P-201ENST00000607561 108 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.2□□□□□ -2.44
CLIP1P30622 MIR4275-201ENST00000636486 87 ntBASIC-0.2□□□□□ -2.44
CLIP1P30622 SNORD3E-201ENST00000362899 217 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 RNA5SP214-201ENST00000363378 118 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AL592310.1-201ENST00000414330 671 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 PDCL2P1-201ENST00000419302 352 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AC024589.1-201ENST00000512207 263 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 MRPS36P5-201ENST00000551909 298 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 BNIP3P24-201ENST00000593398 557 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AL355816.2-201ENST00000610049 647 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AC090517.2-201ENST00000614966 680 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 SNORD3E-202ENST00000627253 216 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AC107982.1-201ENST00000507171 1300 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 RNU6-529P-201ENST00000363383 104 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 SNORA4.2-201ENST00000365313 147 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 RNU6-77P-201ENST00000410554 91 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 AL359704.1-201ENST00000411586 781 ntBASIC-0.21□□□□□ -2.44
CLIP1P30622 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms