Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR424-201ENST00000362227 98 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 SNORD114-6-201ENST00000364393 72 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 Y_RNA.255-201ENST00000364581 97 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 RNU6-939P-201ENST00000384634 107 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 MIR186-201ENST00000384988 86 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL4A5P29400 AL357139.1-201ENST00000407792 426 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.78□□□□□ -2.28
COL4A5P29400 Z99497.1-201ENST00000421282 135 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A5P29400 AL035666.1-201ENST00000446195 348 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AC103851.1-201ENST00000506833 274 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.78□□□□□ -2.28
COL4A5P29400 RNU6-276P-201ENST00000516114 96 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 APOOP3-201ENST00000536787 586 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.78□□□□□ -2.28
COL4A5P29400 MIR3146-201ENST00000580367 79 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AC121334.2-201ENST00000605387 271 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AL078604.3-201ENST00000615580 211 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 AC099786.3-201ENST00000565735 1410 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL4A5P29400 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.78□□□□□ -2.28
COL4A5P29400 ELL2P3-201ENST00000457883 1602 ntBASIC0.78□□□□□ -2.28
COL4A5P29400 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
COL4A5P29400 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
COL4A5P29400 RNU6-222P-201ENST00000362438 107 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A5P29400 USP9YP11-201ENST00000427537 717 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 RPS15AP10-201ENST00000432472 382 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.78□□□□□ -2.29
COL4A5P29400 RPL9P9-202ENST00000466501 579 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 HMGB1P30-201ENST00000492455 606 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC092104.1-201ENST00000497346 1441 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 TPT1P8-201ENST00000510120 555 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 RNU6-902P-201ENST00000517212 91 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 ADI1P3-201ENST00000549509 470 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.78□□□□□ -2.29
COL4A5P29400 AC002400.1-201ENST00000569310 726 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 MIR544B-201ENST00000582372 78 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 BNIP3P30-201ENST00000601184 574 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC112220.3-201ENST00000605502 502 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 MIR8065-201ENST00000620577 100 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC024940.5-201ENST00000622889 474 ntBASIC0.78□□□□□ -2.29
COL4A5P29400 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A5P29400 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.77□□□□□ -2.29
COL4A5P29400 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
COL4A5P29400 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
COL4A5P29400 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 FCF1P10-201ENST00000407590 479 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 RNA5SP100-201ENST00000410903 110 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 RNA5SP59-201ENST00000410922 110 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC016831.2-201ENST00000417179 352 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 RPL23AP30-201ENST00000432419 501 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC010409.1-201ENST00000487382 476 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC009646.1-201ENST00000510455 318 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC025465.3-201ENST00000510570 311 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 RNA5SP285-201ENST00000516619 119 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 SNORA31.17-201ENST00000516953 127 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 RNU6-1092P-201ENST00000516955 87 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AP003392.2-201ENST00000527269 208 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AP003168.1-201ENST00000530091 307 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
COL4A5P29400 BNIP3P6-201ENST00000549284 499 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.77□□□□□ -2.29
COL4A5P29400 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.77□□□□□ -2.29
COL4A5P29400 AP000654.2-201ENST00000605633 586 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 AC097478.2-201ENST00000610572 514 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 MIR6759-201ENST00000638110 65 ntBASIC0.77□□□□□ -2.29
COL4A5P29400 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL4A5P29400 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL4A5P29400 MIR26B-201ENST00000362251 77 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 RNU6-1164P-201ENST00000364428 107 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 RNU6-946P-201ENST00000383878 107 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 RNU6-418P-201ENST00000384035 107 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 Y_RNA.472-201ENST00000384322 102 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 Y_RNA.534-201ENST00000384599 112 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 RNU6-1257P-201ENST00000384625 110 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 RNU2-36P-201ENST00000410361 191 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A5P29400 USP9YP17-201ENST00000444617 696 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A5P29400 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.76□□□□□ -2.29
COL4A5P29400 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.76□□□□□ -2.29
COL4A5P29400 MED28P2-201ENST00000475771 317 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.76□□□□□ -2.29
COL4A5P29400 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A5P29400 AC011979.2-201ENST00000527568 352 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AP003484.1-201ENST00000530974 250 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms