Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH3P22223 RNU6-527P-201ENST00000363425 104 ntBASIC2.37□□□□□ -2.03
CDH3P22223 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
CDH3P22223 RNU6-1329P-201ENST00000365664 107 ntBASIC2.37□□□□□ -2.03
CDH3P22223 SNORA32.2-201ENST00000384049 122 ntBASIC2.37□□□□□ -2.03
CDH3P22223 MT-TL1-201ENST00000386347 75 ntBASIC2.37□□□□□ -2.03
CDH3P22223 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH3P22223 VN1R36P-201ENST00000414936 291 ntBASIC2.37□□□□□ -2.03
CDH3P22223 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH3P22223 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH3P22223 AC112771.1-201ENST00000463581 102 ntBASIC2.37□□□□□ -2.03
CDH3P22223 TRBVA-201ENST00000498804 316 ntBASIC2.37□□□□□ -2.03
CDH3P22223 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH3P22223 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH3P22223 AC092436.3-201ENST00000511788 257 ntBASIC2.37□□□□□ -2.03
CDH3P22223 SNORA25.11-201ENST00000515935 105 ntBASIC2.37□□□□□ -2.03
CDH3P22223 RNU6-256P-201ENST00000516747 97 ntBASIC2.37□□□□□ -2.03
CDH3P22223 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH3P22223 AC079598.5-201ENST00000547460 117 ntBASIC2.37□□□□□ -2.03
CDH3P22223 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH3P22223 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH3P22223 MIR5571-201ENST00000577998 113 ntBASIC2.37□□□□□ -2.03
CDH3P22223 AC090897.2-201ENST00000581715 130 ntBASIC2.37□□□□□ -2.03
CDH3P22223 MIR3672-201ENST00000584290 82 ntBASIC2.37□□□□□ -2.03
CDH3P22223 MIR4765-201ENST00000585007 77 ntBASIC2.37□□□□□ -2.03
CDH3P22223 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDH3P22223 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH3P22223 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
CDH3P22223 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH3P22223 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH3P22223 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.36□□□□□ -2.03
CDH3P22223 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH3P22223 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AL359511.1-201ENST00000402970 211 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.36□□□□□ -2.03
CDH3P22223 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDH3P22223 AC009963.1-201ENST00000417265 157 ntBASIC2.36□□□□□ -2.03
CDH3P22223 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH3P22223 AC092473.1-201ENST00000441098 221 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH3P22223 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH3P22223 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH3P22223 RPL36AP48-201ENST00000485521 314 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC116353.2-201ENST00000505332 712 ntBASIC2.36□□□□□ -2.03
CDH3P22223 PRDX4P1-201ENST00000507189 574 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AK3P2-201ENST00000507976 429 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC008413.1-201ENST00000511864 177 ntBASIC2.36□□□□□ -2.03
CDH3P22223 RNU6-864P-201ENST00000516256 108 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH3P22223 AP002770.2-201ENST00000543613 532 ntBASIC2.36□□□□□ -2.03
CDH3P22223 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH3P22223 AC100830.2-201ENST00000581636 240 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AL138726.1-201ENST00000614873 333 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC009248.2-201ENST00000619826 254 ntBASIC2.36□□□□□ -2.03
CDH3P22223 AC005858.4-201ENST00000623191 700 ntBASIC2.36□□□□□ -2.03
CDH3P22223 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
CDH3P22223 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDH3P22223 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
CDH3P22223 MTND5P30-201ENST00000452896 1731 ntBASIC2.36□□□□□ -2.03
CDH3P22223 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
CDH3P22223 Y_RNA.135-201ENST00000363439 95 ntBASIC2.35□□□□□ -2.03
CDH3P22223 Y_RNA.160-201ENST00000363677 92 ntBASIC2.35□□□□□ -2.03
CDH3P22223 Y_RNA.279-201ENST00000364763 95 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RNA5SP126-201ENST00000365092 109 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH3P22223 RNU6-301P-201ENST00000384277 107 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RNU6-876P-201ENST00000391295 104 ntBASIC2.35□□□□□ -2.03
CDH3P22223 SNORD23.1-201ENST00000408212 104 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RNU6-293P-201ENST00000411259 106 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH3P22223 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH3P22223 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH3P22223 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH3P22223 RPL30P4-201ENST00000429309 333 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AL591043.1-201ENST00000432461 424 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC243964.1-201ENST00000441814 261 ntBASIC2.35□□□□□ -2.03
CDH3P22223 MTCO2P3-201ENST00000442543 421 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RPL32P28-201ENST00000443577 397 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC012308.1-201ENST00000451232 178 ntBASIC2.35□□□□□ -2.03
CDH3P22223 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH3P22223 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH3P22223 AC018437.1-201ENST00000492214 406 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RPL39P5-202ENST00000512505 151 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RNU4-49P-201ENST00000516080 140 ntBASIC2.35□□□□□ -2.03
CDH3P22223 RNA5SP24-201ENST00000516478 95 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
CDH3P22223 TRAV32-201ENST00000553993 340 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH3P22223 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH3P22223 AP001094.1-201ENST00000579805 193 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH3P22223 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC244517.12-201ENST00000623581 663 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AC099654.14-201ENST00000638599 341 ntBASIC2.35□□□□□ -2.03
CDH3P22223 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms