Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A1P20908 RNU6-1287P-201ENST00000362914 107 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 RNU1-39P-201ENST00000383897 165 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 RNU6-116P-201ENST00000384042 109 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 RNU6-1060P-201ENST00000384664 107 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AL078595.1-201ENST00000404458 226 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 RNU2-3P-201ENST00000410144 191 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A1P20908 SRIP3-201ENST00000413200 219 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 ARL5AP1-201ENST00000418991 388 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
COL5A1P20908 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A1P20908 AL356010.1-201ENST00000456364 102 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 MTND1P11-201ENST00000456661 876 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 RPL31P60-201ENST00000478450 367 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 Y_RNA.654-201ENST00000497848 106 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A1P20908 AC098591.2-201ENST00000510152 315 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 SNORA31.3-201ENST00000516029 96 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 NRON-201ENST00000517270 370 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.46□□□□□ -2.18
COL5A1P20908 AF235103.2-201ENST00000525753 346 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.46□□□□□ -2.18
COL5A1P20908 AC023050.3-201ENST00000541142 333 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 HIF1AP1-201ENST00000553642 175 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AL157871.3-201ENST00000557231 293 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC005951.2-201ENST00000576282 495 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 MIR151B-201ENST00000584249 96 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A1P20908 AP002826.1-201ENST00000608835 315 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 AC104985.2-201ENST00000620598 500 ntBASIC1.46□□□□□ -2.18
COL5A1P20908 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.46□□□□□ -2.18
COL5A1P20908 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
COL5A1P20908 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.46□□□□□ -2.18
COL5A1P20908 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL5A1P20908 RNU5A-1-201ENST00000362698 116 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-552P-201ENST00000362869 119 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 SNORA72.1-201ENST00000363485 129 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-741P-201ENST00000383889 107 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MIR514A1-201ENST00000385133 98 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 U3.40-201ENST00000408706 208 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MTND4LP11-201ENST00000422184 280 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC079780.1-201ENST00000428259 207 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNU7-66P-201ENST00000459469 62 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RPS29P1-201ENST00000465274 159 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MRPS17P3-201ENST00000465453 385 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC116562.3-201ENST00000506136 177 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-840P-201ENST00000517275 65 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A1P20908 AC068587.5-201ENST00000528506 175 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.45□□□□□ -2.18
COL5A1P20908 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MIR4703-201ENST00000577728 79 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC012493.3-201ENST00000604494 112 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RMST_3.1-201ENST00000611651 109 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MTND1P37-201ENST00000636562 264 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MIR6767-201ENST00000637302 66 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-451P-201ENST00000362921 107 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-217P-201ENST00000384164 104 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 CISD1P1-201ENST00000393907 327 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNU6-193P-201ENST00000410977 107 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 HMGN2P19-201ENST00000425149 265 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MTCO3P46-201ENST00000425787 232 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A1P20908 NFU1P2-201ENST00000448700 469 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.45□□□□□ -2.18
COL5A1P20908 DYNLL1P5-201ENST00000467158 270 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AL163973.1-201ENST00000484753 577 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNA5SP471-201ENST00000516971 106 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 RNA5SP290-201ENST00000517133 127 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.45□□□□□ -2.18
COL5A1P20908 FAM60BP-201ENST00000578364 658 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MIR4775-201ENST00000581168 75 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC008521.1-201ENST00000587471 187 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AL121992.2-201ENST00000606262 256 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 AC022893.3-201ENST00000607665 437 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 AL133216.2-202ENST00000634512 349 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 U6.114-201ENST00000636407 96 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 MTND5P42-201ENST00000637720 498 ntBASIC1.45□□□□□ -2.18
COL5A1P20908 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL5A1P20908 MTND4P12-201ENST00000498999 1377 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL5A1P20908 Y_RNA.30-201ENST00000362572 97 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RNU6-179P-201ENST00000363350 107 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 SNORD113-7-201ENST00000363762 77 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 Y_RNA.178-201ENST00000363832 102 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RNU6-1072P-201ENST00000384703 107 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 RNU6-443P-201ENST00000384780 107 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 SNORD37.1-201ENST00000390968 65 ntBASIC1.44□□□□□ -2.18
COL5A1P20908 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms