Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.89□□□□□ -2.11
XRCC1P18887 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.89□□□□□ -2.11
XRCC1P18887 Z83846.1-201ENST00000446798 265 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC013470.1-201ENST00000453438 462 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC018868.1-201ENST00000491307 315 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 MTND2P33-201ENST00000506452 1031 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.89□□□□□ -2.11
XRCC1P18887 AC116337.1-201ENST00000509680 687 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.89□□□□□ -2.11
XRCC1P18887 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.89□□□□□ -2.11
XRCC1P18887 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.89□□□□□ -2.11
XRCC1P18887 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.89□□□□□ -2.11
XRCC1P18887 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.89□□□□□ -2.11
XRCC1P18887 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
XRCC1P18887 MIR3124-201ENST00000582636 67 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 MIR3611-201ENST00000584484 83 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC087683.1-201ENST00000591187 441 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 ELOCP5-201ENST00000604924 333 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC017083.3-201ENST00000609955 700 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 U2.17-201ENST00000611454 95 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
XRCC1P18887 AC073534.2-201ENST00000620377 381 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AC090517.3-201ENST00000625170 141 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
XRCC1P18887 Y_RNA.255-201ENST00000364581 97 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 MIR544A-201ENST00000384855 91 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AL030996.1-201ENST00000411430 235 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.88□□□□□ -2.11
XRCC1P18887 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AC073415.1-201ENST00000449240 153 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 MTCO2P18-201ENST00000457151 658 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 RNU7-180P-201ENST00000459240 63 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AC022447.4-201ENST00000504053 364 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 MTND4P7-201ENST00000523876 130 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AC018630.3-201ENST00000542637 96 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 DEFB122-202ENST00000569013 197 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AL356157.2-201ENST00000605122 111 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AL354950.2-201ENST00000617939 290 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 AL359757.2-201ENST00000624309 274 ntBASIC1.88□□□□□ -2.11
XRCC1P18887 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
XRCC1P18887 RNU6-266P-201ENST00000364225 107 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU6-546P-201ENST00000383991 107 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU6-611P-201ENST00000384276 104 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 Y_RNA.481-201ENST00000384373 102 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU6-1274P-201ENST00000384557 107 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU6-1158P-201ENST00000391167 107 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU4-55P-201ENST00000410731 137 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
XRCC1P18887 MTCYBP8-201ENST00000422855 651 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AL451074.3-201ENST00000437709 472 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.87□□□□□ -2.11
XRCC1P18887 SNORA4.4-201ENST00000515921 135 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 RNU6-405P-201ENST00000516637 110 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.87□□□□□ -2.11
XRCC1P18887 CYCSP27-201ENST00000527643 293 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.87□□□□□ -2.11
XRCC1P18887 AC022880.1-201ENST00000534017 973 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AP000763.2-201ENST00000540641 163 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.87□□□□□ -2.11
XRCC1P18887 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.87□□□□□ -2.11
XRCC1P18887 AC110588.1-201ENST00000559699 137 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AC002044.1-201ENST00000606707 158 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 uc_338.34-201ENST00000617467 174 ntBASIC1.87□□□□□ -2.11
XRCC1P18887 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
XRCC1P18887 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.86□□□□□ -2.11
XRCC1P18887 AL354685.2-201ENST00000448218 1447 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 RPS29P13-201ENST00000402041 169 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 RNU2-32P-201ENST00000411193 191 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 RNU6-293P-201ENST00000411259 106 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AL663109.1-201ENST00000411498 844 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AL590556.1-201ENST00000423231 483 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 VN1R108P-201ENST00000431580 830 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC243964.1-201ENST00000441814 261 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 TPT1P7-201ENST00000458300 517 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC107032.1-201ENST00000485945 480 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 SNORA40.12-201ENST00000516329 111 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
XRCC1P18887 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.86□□□□□ -2.11
XRCC1P18887 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms