Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-922P-201ENST00000516753 99 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 AC011979.2-201ENST00000527568 352 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 AC016256.1-201ENST00000547971 354 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 MIR4802-201ENST00000581881 80 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 RNU6-87P-201ENST00000607561 108 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 uc_338.6-201ENST00000613544 171 ntBASIC-0.37□□□□□ -2.47
HMGA1P17096 AC092268.1-201ENST00000342691 405 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU6-877P-201ENST00000383868 107 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU6-793P-201ENST00000384233 104 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RAP1BP3-201ENST00000407180 549 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGA1P17096 FAM204CP-201ENST00000424489 642 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 ELOCP30-201ENST00000447108 299 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 RNU1-131P-201ENST00000458943 161 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 U7.7-201ENST00000459276 60 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGA1P17096 MIR4645-201ENST00000583158 77 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 AL357312.1-201ENST00000603879 298 ntBASIC-0.38□□□□□ -2.47
HMGA1P17096 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGA1P17096 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 RNU6-35P-201ENST00000384530 107 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 MIR520F-201ENST00000384824 87 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
HMGA1P17096 MTND1P28-201ENST00000435623 950 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 AC243964.1-201ENST00000441814 261 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGA1P17096 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.39□□□□□ -2.47
HMGA1P17096 RNU7-90P-201ENST00000459216 62 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 SUMO1P1-201ENST00000497904 306 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 SNORA40.12-201ENST00000516329 111 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 RN7SKP256-201ENST00000517201 314 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.39□□□□□ -2.47
HMGA1P17096 AL158211.1-201ENST00000566763 763 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 MIR4636-201ENST00000582271 80 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.39□□□□□ -2.47
HMGA1P17096 MIR3976-201ENST00000606807 139 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 AC093788.1-201ENST00000609356 927 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 AC084824.4-201ENST00000620106 731 ntBASIC-0.39□□□□□ -2.47
HMGA1P17096 RNU6-386P-201ENST00000362650 107 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 SNORD114-28-201ENST00000363610 72 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 MIR329-1-201ENST00000385028 80 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC-0.4□□□□□ -2.47
HMGA1P17096 ELOCP14-201ENST00000428070 331 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 MTCO1P3-201ENST00000429327 192 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 ELOCP7-201ENST00000439968 331 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 RNU7-34P-201ENST00000459394 64 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.4□□□□□ -2.47
HMGA1P17096 SNORD116-30-201ENST00000516468 85 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 AC069113.3-201ENST00000521019 150 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 MIR5589-201ENST00000579442 60 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGA1P17096 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 AC240442.1-201ENST00000616055 283 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 MIR1295B-201ENST00000636144 60 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 AL590396.2-201ENST00000636511 1041 ntBASIC-0.4□□□□□ -2.47
HMGA1P17096 SNORA4.2-201ENST00000365313 147 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 MIR186-201ENST00000384988 86 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 SNORA75.2-201ENST00000391138 150 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 SNORA75.3-201ENST00000391231 150 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
HMGA1P17096 RNU6-233P-201ENST00000410845 141 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 COX6CP10-201ENST00000416832 224 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 MTND1P20-201ENST00000430341 950 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC116655.1-201ENST00000508324 901 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.48
HMGA1P17096 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.41□□□□□ -2.48
HMGA1P17096 AC023157.2-201ENST00000540596 141 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC022523.2-201ENST00000561045 150 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 RPL23AP91-201ENST00000569211 455 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 SNRPGP20-201ENST00000604477 205 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC004853.1-201ENST00000604902 698 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC117490.2-201ENST00000610042 594 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC021506.2-201ENST00000612354 169 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
HMGA1P17096 LINC02555-201ENST00000563933 1951 ntBASIC-0.41□□□□□ -2.48
HMGA1P17096 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 SNORA51.6-201ENST00000384151 125 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 RPL21P24-201ENST00000413752 448 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGA1P17096 AC007435.1-201ENST00000421086 415 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGA1P17096 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 MTCO2P34-201ENST00000421994 607 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.42□□□□□ -2.48
HMGA1P17096 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.42□□□□□ -2.48
HMGA1P17096 AC121161.1-201ENST00000510606 652 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 SUMO2P18-201ENST00000518873 252 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.42□□□□□ -2.48
HMGA1P17096 SUMO2P14-201ENST00000604488 293 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 AC011374.2-201ENST00000607135 526 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 AC138749.5-201ENST00000611461 208 ntBASIC-0.42□□□□□ -2.48
HMGA1P17096 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.43□□□□□ -2.48
HMGA1P17096 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms