Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 COPS8P3-201ENST00000526024 482 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 BNIP3P27-201ENST00000599991 412 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 Z82243.1-201ENST00000609432 473 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 OR5AK4P-201ENST00000635912 903 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.02□□□□□ -2.41
COL6A3P12111 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 SNORA12-201ENST00000391162 147 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.03□□□□□ -2.41
COL6A3P12111 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.03□□□□□ -2.41
COL6A3P12111 FAM204CP-201ENST00000424489 642 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 NANOGP2-201ENST00000435391 727 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 RNU7-90P-201ENST00000459216 62 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A3P12111 RNU6-118P-201ENST00000516552 102 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 RNU6-197P-201ENST00000516680 100 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AC022523.2-201ENST00000561045 150 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AL391994.1-201ENST00000254724 282 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A3P12111 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.03□□□□□ -2.41
COL6A3P12111 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A3P12111 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL6A3P12111 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 SNORD19.2-201ENST00000516978 73 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 RNA5SP503-201ENST00000517047 117 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 Z98751.3-201ENST00000604447 521 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AL161729.4-201ENST00000604650 476 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AC112220.2-201ENST00000605513 533 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 RNU6-91P-201ENST00000607774 107 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AC021851.1-201ENST00000608537 1082 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 AC107982.1-201ENST00000507171 1300 ntBASIC-0.03□□□□□ -2.41
COL6A3P12111 SNORA36.2-201ENST00000384004 127 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 CALM2P3-201ENST00000400429 449 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MTATP6P31-201ENST00000406985 692 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC114482.1-201ENST00000418010 247 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL6A3P12111 MTND4LP10-201ENST00000435146 291 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 MTCO2P25-201ENST00000447065 681 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL353691.1-201ENST00000451332 387 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 snoU13.25-201ENST00000458945 104 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RNA5SP269-201ENST00000459032 137 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL049714.1-201ENST00000466686 347 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC104629.2-201ENST00000468627 598 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 SNORA31.17-201ENST00000516953 127 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.04□□□□□ -2.42
COL6A3P12111 LRRC34P1-201ENST00000542742 915 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 HMGB1P33-201ENST00000563485 527 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MIR3664-201ENST00000579074 99 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL6A3P12111 RMST_4.1-201ENST00000616886 107 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC073968.1-201ENST00000618594 637 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC138393.1-203ENST00000327086 343 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL6A3P12111 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL6A3P12111 AC063976.4-201ENST00000421971 163 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 SNX2P2-201ENST00000424553 323 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 SMURF2P1-201ENST00000514992 481 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 SNORA25.11-201ENST00000515935 105 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RNU6-803P-201ENST00000516034 102 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RN7SKP258-201ENST00000517151 304 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 AL391813.1-201ENST00000603098 260 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL6A3P12111 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL6A3P12111 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RNU6-486P-201ENST00000363116 107 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 SNORA16.2-201ENST00000390991 127 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MIR1303-201ENST00000408625 86 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL592447.1-201ENST00000447592 540 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC016925.1-201ENST00000458303 298 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC018868.1-201ENST00000491307 315 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC093534.1-201ENST00000504977 132 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL6A3P12111 RNU6-165P-201ENST00000517170 99 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 IGJP1-201ENST00000522682 475 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC026616.1-201ENST00000523157 525 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC124293.1-201ENST00000530034 493 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL6A3P12111 AL049870.4-201ENST00000555741 486 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AC027104.1-201ENST00000563702 681 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 BPTFP1-201ENST00000579209 492 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MIR4431-201ENST00000579990 94 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 AL031176.1-201ENST00000604554 466 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 BX284668.6-201ENST00000606899 438 ntBASIC-0.04□□□□□ -2.42
COL6A3P12111 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms