Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.17□□□□□ -1.9
RHOP08100 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.17□□□□□ -1.9
RHOP08100 AC117440.1-201ENST00000474107 571 ntBASIC3.17□□□□□ -1.9
RHOP08100 RPS27AP10-201ENST00000496103 208 ntBASIC3.17□□□□□ -1.9
RHOP08100 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.17□□□□□ -1.9
RHOP08100 SNORA31.18-201ENST00000517043 134 ntBASIC3.17□□□□□ -1.9
RHOP08100 AC010186.2-204ENST00000537668 439 ntBASIC3.17□□□□□ -1.9
RHOP08100 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
RHOP08100 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
RHOP08100 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.17□□□□□ -1.9
RHOP08100 AL021879.1-201ENST00000611756 288 ntBASIC3.17□□□□□ -1.9
RHOP08100 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.17□□□□□ -1.9
RHOP08100 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.17□□□□□ -1.9
RHOP08100 AC090617.7-201ENST00000623952 126 ntBASIC3.17□□□□□ -1.9
RHOP08100 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.17□□□□□ -1.9
RHOP08100 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RHOP08100 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.17□□□□□ -1.9
RHOP08100 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
RHOP08100 Y_RNA.47-201ENST00000362697 108 ntBASIC3.16□□□□□ -1.9
RHOP08100 RNU6-898P-201ENST00000365627 104 ntBASIC3.16□□□□□ -1.9
RHOP08100 Y_RNA.574-201ENST00000384766 95 ntBASIC3.16□□□□□ -1.9
RHOP08100 MIR1252-201ENST00000408861 65 ntBASIC3.16□□□□□ -1.9
RHOP08100 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.16□□□□□ -1.9
RHOP08100 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.16□□□□□ -1.9
RHOP08100 AL731563.1-201ENST00000442202 214 ntBASIC3.16□□□□□ -1.9
RHOP08100 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
RHOP08100 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
RHOP08100 AC010655.3-201ENST00000478818 450 ntBASIC3.16□□□□□ -1.9
RHOP08100 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.16□□□□□ -1.9
RHOP08100 RNU6-911P-201ENST00000516523 104 ntBASIC3.16□□□□□ -1.9
RHOP08100 AC144568.1-201ENST00000520139 137 ntBASIC3.16□□□□□ -1.9
RHOP08100 IGHV3-76-201ENST00000522465 295 ntBASIC3.16□□□□□ -1.9
RHOP08100 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.16□□□□□ -1.9
RHOP08100 HSBP1P1-201ENST00000555205 166 ntBASIC3.16□□□□□ -1.9
RHOP08100 MIR5188-201ENST00000583467 113 ntBASIC3.16□□□□□ -1.9
RHOP08100 VN1R91P-201ENST00000594377 169 ntBASIC3.16□□□□□ -1.9
RHOP08100 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.16□□□□□ -1.9
RHOP08100 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
RHOP08100 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHOP08100 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.9
RHOP08100 RNU6-450P-201ENST00000364654 107 ntBASIC3.15□□□□□ -1.91
RHOP08100 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
RHOP08100 SNORD14.1-201ENST00000365609 90 ntBASIC3.15□□□□□ -1.91
RHOP08100 Y_RNA.401-201ENST00000383965 117 ntBASIC3.15□□□□□ -1.91
RHOP08100 Y_RNA.424-201ENST00000384063 103 ntBASIC3.15□□□□□ -1.91
RHOP08100 RNU6-700P-201ENST00000391043 107 ntBASIC3.15□□□□□ -1.91
RHOP08100 SAR1AP2-201ENST00000392696 594 ntBASIC3.15□□□□□ -1.91
RHOP08100 MTCYBP2-201ENST00000407745 171 ntBASIC3.15□□□□□ -1.91
RHOP08100 AC007098.1-201ENST00000420122 367 ntBASIC3.15□□□□□ -1.91
RHOP08100 DPH3P2-201ENST00000422618 250 ntBASIC3.15□□□□□ -1.91
RHOP08100 AC124916.1-201ENST00000444020 547 ntBASIC3.15□□□□□ -1.91
RHOP08100 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.15□□□□□ -1.91
RHOP08100 RN7SKP210-201ENST00000459176 261 ntBASIC3.15□□□□□ -1.91
RHOP08100 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
RHOP08100 RNA5SP367-201ENST00000516557 118 ntBASIC3.15□□□□□ -1.91
RHOP08100 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
RHOP08100 U4.1-201ENST00000620349 87 ntBASIC3.15□□□□□ -1.91
RHOP08100 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHOP08100 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
RHOP08100 Y_RNA.193-201ENST00000363979 102 ntBASIC3.14□□□□□ -1.91
RHOP08100 Y_RNA.276-201ENST00000364732 109 ntBASIC3.14□□□□□ -1.91
RHOP08100 SET-203ENST00000372688 801 ntTSL 2 BASIC3.14□□□□□ -1.91
RHOP08100 Y_RNA.526-201ENST00000384572 110 ntBASIC3.14□□□□□ -1.91
RHOP08100 AC114482.1-201ENST00000418010 247 ntBASIC3.14□□□□□ -1.91
RHOP08100 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.14□□□□□ -1.91
RHOP08100 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
RHOP08100 AP002884.2-201ENST00000471647 395 ntBASIC3.14□□□□□ -1.91
RHOP08100 AC006445.2-201ENST00000510061 472 ntBASIC3.14□□□□□ -1.91
RHOP08100 SCGB1D5P-201ENST00000515134 247 ntBASIC3.14□□□□□ -1.91
RHOP08100 RNU6-928P-201ENST00000516876 104 ntBASIC3.14□□□□□ -1.91
RHOP08100 Y_RNA.715-201ENST00000517082 110 ntBASIC3.14□□□□□ -1.91
RHOP08100 AL590705.4-201ENST00000532209 134 ntBASIC3.14□□□□□ -1.91
RHOP08100 NACAP3-201ENST00000552100 481 ntBASIC3.14□□□□□ -1.91
RHOP08100 AL161670.1-201ENST00000554348 137 ntBASIC3.14□□□□□ -1.91
RHOP08100 AL391261.3-201ENST00000557194 520 ntBASIC3.14□□□□□ -1.91
RHOP08100 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RHOP08100 MIR3609-201ENST00000582661 80 ntBASIC3.14□□□□□ -1.91
RHOP08100 ELOCP29-201ENST00000588193 334 ntBASIC3.14□□□□□ -1.91
RHOP08100 7SK.7-201ENST00000603504 247 ntBASIC3.14□□□□□ -1.91
RHOP08100 AC124312.5-201ENST00000604451 268 ntBASIC3.14□□□□□ -1.91
RHOP08100 MIR1244-1-201ENST00000612829 85 ntBASIC3.14□□□□□ -1.91
RHOP08100 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RHOP08100 MIR1244-3-201ENST00000635744 85 ntBASIC3.14□□□□□ -1.91
RHOP08100 MIR1244-2-201ENST00000636449 85 ntBASIC3.14□□□□□ -1.91
RHOP08100 MIR1244-4-202ENST00000636813 85 ntBASIC3.14□□□□□ -1.91
RHOP08100 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
RHOP08100 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
RHOP08100 SNORA63.7-201ENST00000365579 123 ntBASIC3.13□□□□□ -1.91
RHOP08100 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHOP08100 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
RHOP08100 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
RHOP08100 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.13□□□□□ -1.91
RHOP08100 AC073910.1-201ENST00000445047 438 ntBASIC3.13□□□□□ -1.91
RHOP08100 RPL26P9-201ENST00000457466 433 ntBASIC3.13□□□□□ -1.91
RHOP08100 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
RHOP08100 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.13□□□□□ -1.91
RHOP08100 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
RHOP08100 RPL23AP49-201ENST00000492925 468 ntBASIC3.13□□□□□ -1.91
RHOP08100 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
RHOP08100 MRPS35P2-201ENST00000508242 191 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms