Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC132479.1-201ENST00000449160 144 ntBASIC0.89□□□□□ -2.27
APOEP02649 HMGN2P9-201ENST00000476875 229 ntBASIC0.89□□□□□ -2.27
APOEP02649 AC005741.1-201ENST00000511094 432 ntBASIC0.89□□□□□ -2.27
APOEP02649 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.89□□□□□ -2.27
APOEP02649 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
APOEP02649 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.89□□□□□ -2.27
APOEP02649 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
APOEP02649 MIR548AC-201ENST00000585049 88 ntBASIC0.89□□□□□ -2.27
APOEP02649 FAM106DP-201ENST00000586416 501 ntBASIC0.89□□□□□ -2.27
APOEP02649 AL606834.3-201ENST00000602615 496 ntBASIC0.89□□□□□ -2.27
APOEP02649 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
APOEP02649 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
APOEP02649 AL365434.2-201ENST00000607979 234 ntBASIC0.89□□□□□ -2.27
APOEP02649 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.89□□□□□ -2.27
APOEP02649 PART1_2.1-201ENST00000612397 250 ntBASIC0.89□□□□□ -2.27
APOEP02649 AC131159.1-201ENST00000621854 213 ntBASIC0.89□□□□□ -2.27
APOEP02649 RMST_7.1-201ENST00000621935 268 ntBASIC0.89□□□□□ -2.27
APOEP02649 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
APOEP02649 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
APOEP02649 SNORA4.1-201ENST00000364263 144 ntBASIC0.88□□□□□ -2.27
APOEP02649 Y_RNA.226-201ENST00000364337 114 ntBASIC0.88□□□□□ -2.27
APOEP02649 RNY4P16-201ENST00000364768 94 ntBASIC0.88□□□□□ -2.27
APOEP02649 MIR544A-201ENST00000384855 91 ntBASIC0.88□□□□□ -2.27
APOEP02649 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
APOEP02649 RNU2-72P-201ENST00000411175 163 ntBASIC0.88□□□□□ -2.27
APOEP02649 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.88□□□□□ -2.27
APOEP02649 AC145146.1-201ENST00000496370 254 ntBASIC0.88□□□□□ -2.27
APOEP02649 MTCO3P28-201ENST00000513351 515 ntBASIC0.88□□□□□ -2.27
APOEP02649 RNU6-276P-201ENST00000516114 96 ntBASIC0.88□□□□□ -2.27
APOEP02649 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.88□□□□□ -2.27
APOEP02649 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.88□□□□□ -2.27
APOEP02649 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.88□□□□□ -2.27
APOEP02649 BNIP3P8-201ENST00000597863 560 ntBASIC0.88□□□□□ -2.27
APOEP02649 MTND3P19-201ENST00000603825 345 ntBASIC0.88□□□□□ -2.27
APOEP02649 AL451064.1-201ENST00000607718 471 ntBASIC0.88□□□□□ -2.27
APOEP02649 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.88□□□□□ -2.27
APOEP02649 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.88□□□□□ -2.27
APOEP02649 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.88□□□□□ -2.27
APOEP02649 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
APOEP02649 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
APOEP02649 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
APOEP02649 Y_RNA.224-201ENST00000364308 111 ntBASIC0.87□□□□□ -2.27
APOEP02649 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
APOEP02649 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
APOEP02649 RNA5SP247-201ENST00000411181 105 ntBASIC0.87□□□□□ -2.27
APOEP02649 MTCO3P41-201ENST00000414801 328 ntBASIC0.87□□□□□ -2.27
APOEP02649 AL031779.1-201ENST00000415663 330 ntBASIC0.87□□□□□ -2.27
APOEP02649 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.87□□□□□ -2.27
APOEP02649 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.87□□□□□ -2.27
APOEP02649 AL163195.1-201ENST00000496941 348 ntBASIC0.87□□□□□ -2.27
APOEP02649 RNU2-10P-201ENST00000516375 211 ntBASIC0.87□□□□□ -2.27
APOEP02649 AC107934.1-201ENST00000522215 217 ntBASIC0.87□□□□□ -2.27
APOEP02649 AC068587.4-201ENST00000533893 186 ntBASIC0.87□□□□□ -2.27
APOEP02649 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.87□□□□□ -2.27
APOEP02649 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.87□□□□□ -2.27
APOEP02649 AC136932.1-201ENST00000574771 208 ntBASIC0.87□□□□□ -2.27
APOEP02649 AC069114.2-201ENST00000604699 304 ntBASIC0.87□□□□□ -2.27
APOEP02649 AC018889.1-201ENST00000605372 397 ntBASIC0.87□□□□□ -2.27
APOEP02649 AL359547.2-201ENST00000615810 418 ntBASIC0.87□□□□□ -2.27
APOEP02649 AC097372.5-201ENST00000623665 376 ntBASIC0.87□□□□□ -2.27
APOEP02649 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
APOEP02649 RNU6-862P-201ENST00000362804 105 ntBASIC0.86□□□□□ -2.27
APOEP02649 RNU6-78P-201ENST00000362897 107 ntBASIC0.86□□□□□ -2.27
APOEP02649 SNORA29-201ENST00000384183 140 ntBASIC0.86□□□□□ -2.27
APOEP02649 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
APOEP02649 RNU4-22P-201ENST00000411058 166 ntBASIC0.86□□□□□ -2.27
APOEP02649 CYCSP33-201ENST00000414485 327 ntBASIC0.86□□□□□ -2.27
APOEP02649 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.86□□□□□ -2.27
APOEP02649 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.86□□□□□ -2.27
APOEP02649 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.86□□□□□ -2.27
APOEP02649 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
APOEP02649 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.86□□□□□ -2.27
APOEP02649 RNU1-86P-201ENST00000516108 154 ntBASIC0.86□□□□□ -2.27
APOEP02649 RNU1-107P-201ENST00000516617 154 ntBASIC0.86□□□□□ -2.27
APOEP02649 RN7SKP88-201ENST00000516847 250 ntBASIC0.86□□□□□ -2.27
APOEP02649 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.86□□□□□ -2.27
APOEP02649 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.86□□□□□ -2.27
APOEP02649 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.86□□□□□ -2.27
APOEP02649 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
APOEP02649 MIR3976-201ENST00000606807 139 ntBASIC0.86□□□□□ -2.27
APOEP02649 BX284668.6-201ENST00000606899 438 ntBASIC0.86□□□□□ -2.27
APOEP02649 AC092106.3-201ENST00000611308 722 ntBASIC0.86□□□□□ -2.27
APOEP02649 7SK.8-201ENST00000612110 250 ntBASIC0.86□□□□□ -2.27
APOEP02649 AC083806.3-201ENST00000614016 455 ntBASIC0.86□□□□□ -2.27
APOEP02649 7SK.11-201ENST00000615477 250 ntBASIC0.86□□□□□ -2.27
APOEP02649 AC026585.1-201ENST00000619582 524 ntBASIC0.86□□□□□ -2.27
APOEP02649 7SK.13-201ENST00000622040 250 ntBASIC0.86□□□□□ -2.27
APOEP02649 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
APOEP02649 AL445523.1-201ENST00000451184 1362 ntBASIC0.85□□□□□ -2.27
APOEP02649 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
APOEP02649 RNU6-968P-201ENST00000384076 107 ntBASIC0.85□□□□□ -2.27
APOEP02649 SNORA25-201ENST00000384384 134 ntBASIC0.85□□□□□ -2.27
APOEP02649 MIR194-1-201ENST00000384892 85 ntBASIC0.85□□□□□ -2.27
APOEP02649 AL356776.1-201ENST00000406574 447 ntBASIC0.85□□□□□ -2.27
APOEP02649 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.85□□□□□ -2.27
APOEP02649 SNX2P2-201ENST00000424553 323 ntBASIC0.85□□□□□ -2.27
APOEP02649 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.85□□□□□ -2.27
APOEP02649 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.85□□□□□ -2.27
APOEP02649 SNORD116-28-201ENST00000516123 91 ntBASIC0.85□□□□□ -2.27
APOEP02649 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms