Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TPTE2P4-201ENST00000258589 1605 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
COL2A1P02458 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-1115P-201ENST00000362490 106 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-562P-201ENST00000362731 107 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNY1P10-201ENST00000363268 113 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-288P-201ENST00000363690 104 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNY3P11-201ENST00000364153 102 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-946P-201ENST00000383878 107 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 Y_RNA.594-201ENST00000410373 140 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RPL21P24-201ENST00000413752 448 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 ARL5AP1-201ENST00000418991 388 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 USP9YP30-201ENST00000430729 455 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AL445646.1-201ENST00000431784 216 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 SNRPEP4-201ENST00000435815 279 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RPL21P2-201ENST00000440049 481 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 Z98949.2-201ENST00000440996 144 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.5□□□□□ -2.01
COL2A1P02458 U8.20-201ENST00000459445 131 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 SNRPGP3-201ENST00000469405 227 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC010631.1-201ENST00000474150 156 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC010655.3-201ENST00000478818 450 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-470P-201ENST00000515954 104 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-1092P-201ENST00000516955 87 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-794P-201ENST00000517261 64 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 RNU6-323P-201ENST00000521915 107 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.5□□□□□ -2.01
COL2A1P02458 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.5□□□□□ -2.01
COL2A1P02458 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 U2.1-201ENST00000618978 145 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
COL2A1P02458 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL2A1P02458 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.49□□□□□ -2.01
COL2A1P02458 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.49□□□□□ -2.01
COL2A1P02458 RNU6-989P-201ENST00000362756 107 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 RNU6-379P-201ENST00000363813 104 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 RNA5SP167-201ENST00000365461 116 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 Y_RNA.476-201ENST00000384347 108 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 RPL7P37-201ENST00000425095 738 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 AC005094.1-201ENST00000440420 368 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.49□□□□□ -2.01
COL2A1P02458 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.49□□□□□ -2.01
COL2A1P02458 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.49□□□□□ -2.01
COL2A1P02458 AC026782.1-201ENST00000512952 449 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 RNU6-976P-201ENST00000516086 111 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 SCARNA16.2-201ENST00000516520 172 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 RN7SKP277-201ENST00000516895 283 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.49□□□□□ -2.01
COL2A1P02458 MYL12BP1-201ENST00000569826 507 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
COL2A1P02458 AC092447.9-201ENST00000603395 144 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 AC012443.1-201ENST00000605605 231 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL2A1P02458 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.49□□□□□ -2.01
COL2A1P02458 AC138627.2-201ENST00000624202 601 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 AP001148.1-201ENST00000624124 2359 ntBASIC2.49□□□□□ -2.01
COL2A1P02458 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL2A1P02458 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.49□□□□□ -2.01
COL2A1P02458 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL2A1P02458 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.48□□□□□ -2.01
COL2A1P02458 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL2A1P02458 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.48□□□□□ -2.01
COL2A1P02458 RNU6-99P-201ENST00000364721 107 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 Y_RNA.493-201ENST00000384422 102 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 RNU2-3P-201ENST00000410144 191 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC009310.1-201ENST00000414414 451 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.48□□□□□ -2.01
COL2A1P02458 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.48□□□□□ -2.01
COL2A1P02458 MRPS18CP6-201ENST00000423587 223 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC008267.5-201ENST00000424928 265 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.48□□□□□ -2.01
COL2A1P02458 OR2AQ1P-201ENST00000451972 200 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 snoU13.18-201ENST00000459483 104 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC022493.2-201ENST00000506122 481 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC009902.1-201ENST00000519351 183 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.48□□□□□ -2.01
COL2A1P02458 NDUFA5P6-201ENST00000542110 379 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC025423.5-201ENST00000550230 219 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC126177.3-201ENST00000551839 688 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AL161713.1-201ENST00000555538 145 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.48□□□□□ -2.01
COL2A1P02458 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.48□□□□□ -2.01
COL2A1P02458 AC006329.2-201ENST00000611491 394 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 HMGB1P24-202ENST00000615653 685 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC103705.1-201ENST00000619013 241 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 XIST_intron.1-201ENST00000619444 68 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 AC078938.1-201ENST00000620993 318 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.48□□□□□ -2.01
COL2A1P02458 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
COL2A1P02458 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.48□□□□□ -2.01
COL2A1P02458 AC121333.1-201ENST00000567488 2709 ntBASIC2.48□□□□□ -2.01
COL2A1P02458 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
COL2A1P02458 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
COL2A1P02458 Y_RNA.151-201ENST00000363566 112 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms