Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU1-124P-201ENST00000363861 145 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 RNU6-817P-201ENST00000391083 104 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 RNA5SP390-201ENST00000410191 113 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 RNU6-1025P-201ENST00000410629 104 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC083875.1-201ENST00000419509 405 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AP000542.1-201ENST00000448473 371 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC093899.1-201ENST00000457984 376 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 MTND1P16-201ENST00000465177 898 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.65□□□□□ -2.31
COL1A1P02452 SUMO2P5-201ENST00000506790 245 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 MTCYBP40-201ENST00000509390 1135 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC093259.1-201ENST00000509755 300 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 RN7SKP256-201ENST00000517201 314 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.65□□□□□ -2.31
COL1A1P02452 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.65□□□□□ -2.31
COL1A1P02452 MTND3P13-201ENST00000574391 343 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC084824.5-201ENST00000612009 413 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AL512506.1-201ENST00000613918 449 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AL512427.1-201ENST00000618593 349 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 FRG1KP-201ENST00000623592 341 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AL391516.1-201ENST00000554380 2449 ntBASIC0.65□□□□□ -2.31
COL1A1P02452 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-23P-201ENST00000363283 107 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-1210P-201ENST00000363775 107 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNA5SP493-201ENST00000364115 91 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-743P-201ENST00000364151 106 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-777P-201ENST00000364265 104 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-487P-201ENST00000365430 104 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 MIR29B2-201ENST00000385055 81 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RN7SKP266-201ENST00000410232 287 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNA5SP25-201ENST00000410815 110 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 EIF1P1-201ENST00000421436 341 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 UBE2V1P8-201ENST00000437166 265 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 PRPS1P1-201ENST00000445305 876 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 AL139824.2-201ENST00000458731 1095 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-333P-201ENST00000459117 107 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 MED28P2-201ENST00000475771 317 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-965P-201ENST00000516721 96 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COL1A1P02452 CENPUP1-201ENST00000526649 1202 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 AC137800.2-201ENST00000574375 120 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 MIR4661-201ENST00000582720 75 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AP000860.1-201ENST00000605250 559 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-88P-201ENST00000606801 100 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC004492.1-201ENST00000607036 742 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AL021368.1-201ENST00000607490 540 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 Z82243.1-201ENST00000609432 473 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.64□□□□□ -2.31
COL1A1P02452 AL365204.3-201ENST00000612448 685 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.64□□□□□ -2.31
COL1A1P02452 AC130454.1-201ENST00000622948 401 ntBASIC0.64□□□□□ -2.31
COL1A1P02452 RNU6-462P-201ENST00000362659 105 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-112P-201ENST00000363599 104 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-944P-201ENST00000364023 107 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-622P-201ENST00000384272 103 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-1274P-201ENST00000384557 107 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-160P-201ENST00000384591 107 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU2-23P-201ENST00000410545 195 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 MTND1P3-201ENST00000484956 952 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC079395.1-201ENST00000510981 262 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 RNU6-1315P-201ENST00000517187 99 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.63□□□□□ -2.31
COL1A1P02452 AC018630.3-201ENST00000542637 96 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
COL1A1P02452 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.63□□□□□ -2.31
COL1A1P02452 CYP3A52P-201ENST00000563326 91 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC007363.1-201ENST00000604736 620 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AL158032.1-201ENST00000605401 106 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 AC112220.2-201ENST00000605513 533 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 MTND5P42-201ENST00000637720 498 ntBASIC0.63□□□□□ -2.31
COL1A1P02452 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
COL1A1P02452 Y_RNA.33-201ENST00000362591 102 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 Y_RNA.255-201ENST00000364581 97 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 Y_RNA.534-201ENST00000384599 112 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.62□□□□□ -2.31
COL1A1P02452 RNU2-62P-201ENST00000410868 191 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC016831.2-201ENST00000417179 352 ntBASIC0.62□□□□□ -2.31
COL1A1P02452 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms