Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.07□□□□□ -2.4
TNFP01375 AC105758.1-201ENST00000506038 399 ntBASIC0.07□□□□□ -2.4
TNFP01375 RN7SKP258-201ENST00000517151 304 ntBASIC0.07□□□□□ -2.4
TNFP01375 AL442163.3-201ENST00000554110 156 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.07□□□□□ -2.4
TNFP01375 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.07□□□□□ -2.4
TNFP01375 AL391001.1-201ENST00000602747 715 ntBASIC0.07□□□□□ -2.4
TNFP01375 AP002906.1-201ENST00000603405 233 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC012557.2-201ENST00000605919 418 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC092106.3-201ENST00000611308 722 ntBASIC0.07□□□□□ -2.4
TNFP01375 MIR2909-201ENST00000617113 69 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC006213.5-201ENST00000619673 288 ntBASIC0.07□□□□□ -2.4
TNFP01375 AC099654.9-201ENST00000637055 678 ntBASIC0.07□□□□□ -2.4
TNFP01375 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.06□□□□□ -2.4
TNFP01375 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.06□□□□□ -2.4
TNFP01375 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.06□□□□□ -2.4
TNFP01375 MIRLET7D-201ENST00000362263 87 ntBASIC0.06□□□□□ -2.4
TNFP01375 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
TNFP01375 Y_RNA.332-201ENST00000365271 113 ntBASIC0.06□□□□□ -2.4
TNFP01375 RNU6-843P-201ENST00000384454 104 ntBASIC0.06□□□□□ -2.4
TNFP01375 RNU6-1054P-201ENST00000411293 104 ntBASIC0.06□□□□□ -2.4
TNFP01375 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.06□□□□□ -2.4
TNFP01375 MTND4P20-201ENST00000424125 869 ntBASIC0.06□□□□□ -2.4
TNFP01375 RPS15AP10-201ENST00000432472 382 ntBASIC0.06□□□□□ -2.4
TNFP01375 RPEP5-201ENST00000441137 268 ntBASIC0.06□□□□□ -2.4
TNFP01375 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.06□□□□□ -2.4
TNFP01375 AC233266.1-201ENST00000454518 96 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC113410.1-201ENST00000505029 247 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC010587.2-201ENST00000511727 448 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.06□□□□□ -2.4
TNFP01375 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.06□□□□□ -2.4
TNFP01375 MIR3976-201ENST00000606807 139 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC242852.1-201ENST00000612151 96 ntBASIC0.06□□□□□ -2.4
TNFP01375 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC073349.3-201ENST00000617616 186 ntBASIC0.06□□□□□ -2.4
TNFP01375 AC244015.1-201ENST00000622301 99 ntBASIC0.06□□□□□ -2.4
TNFP01375 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.06□□□□□ -2.4
TNFP01375 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TNFP01375 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
TNFP01375 SUGT1P1-201ENST00000379514 476 ntBASIC0.05□□□□□ -2.4
TNFP01375 RNY1P8-201ENST00000383970 114 ntBASIC0.05□□□□□ -2.4
TNFP01375 RNU6-114P-201ENST00000384704 105 ntBASIC0.05□□□□□ -2.4
TNFP01375 MIR217-201ENST00000384817 110 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC011233.1-201ENST00000422812 283 ntBASIC0.05□□□□□ -2.4
TNFP01375 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.05□□□□□ -2.4
TNFP01375 RAC1P6-201ENST00000423911 575 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.05□□□□□ -2.4
TNFP01375 MTCO3P29-201ENST00000432119 779 ntBASIC0.05□□□□□ -2.4
TNFP01375 RPL39P38-201ENST00000467018 153 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC091435.1-201ENST00000505442 584 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC024589.1-201ENST00000512207 263 ntBASIC0.05□□□□□ -2.4
TNFP01375 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
TNFP01375 RNU4-77P-201ENST00000516692 156 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC009902.1-201ENST00000519351 183 ntBASIC0.05□□□□□ -2.4
TNFP01375 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
TNFP01375 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.05□□□□□ -2.4
TNFP01375 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
TNFP01375 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.05□□□□□ -2.4
TNFP01375 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.05□□□□□ -2.4
TNFP01375 AC107982.1-201ENST00000507171 1300 ntBASIC0.05□□□□□ -2.4
TNFP01375 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
TNFP01375 RNU6-487P-201ENST00000365430 104 ntBASIC0.04□□□□□ -2.4
TNFP01375 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
TNFP01375 SNORA80D-201ENST00000384488 135 ntBASIC0.04□□□□□ -2.4
TNFP01375 MIR32-201ENST00000384965 70 ntBASIC0.04□□□□□ -2.4
TNFP01375 AL590556.1-201ENST00000423231 483 ntBASIC0.04□□□□□ -2.4
TNFP01375 COX7BP2-201ENST00000437976 242 ntBASIC0.04□□□□□ -2.4
TNFP01375 DAP3P1-201ENST00000441522 278 ntBASIC0.04□□□□□ -2.4
TNFP01375 AL606662.1-201ENST00000445763 553 ntBASIC0.04□□□□□ -2.4
TNFP01375 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.04□□□□□ -2.4
TNFP01375 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.04□□□□□ -2.4
TNFP01375 snoU13.14-201ENST00000459372 104 ntBASIC0.04□□□□□ -2.4
TNFP01375 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.04□□□□□ -2.4
TNFP01375 AC009646.1-201ENST00000510455 318 ntBASIC0.04□□□□□ -2.4
TNFP01375 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.04□□□□□ -2.4
TNFP01375 MIR449C-201ENST00000516047 92 ntBASIC0.04□□□□□ -2.4
TNFP01375 BNIP3P6-201ENST00000549284 499 ntBASIC0.04□□□□□ -2.4
TNFP01375 MIR4709-201ENST00000577272 72 ntBASIC0.04□□□□□ -2.4
TNFP01375 AC060771.1-201ENST00000582031 164 ntBASIC0.04□□□□□ -2.4
TNFP01375 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.04□□□□□ -2.4
TNFP01375 AC092656.1-203ENST00000624134 423 ntBASIC0.04□□□□□ -2.4
TNFP01375 MIR1322-201ENST00000638013 71 ntBASIC0.04□□□□□ -2.4
TNFP01375 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
TNFP01375 SNORD65C-201ENST00000390962 71 ntBASIC0.03□□□□□ -2.4
TNFP01375 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
TNFP01375 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
TNFP01375 RNU2-23P-201ENST00000410545 195 ntBASIC0.03□□□□□ -2.4
TNFP01375 FABP5P4-201ENST00000437203 171 ntBASIC0.03□□□□□ -2.4
TNFP01375 AC245047.7-201ENST00000440265 293 ntBASIC0.03□□□□□ -2.4
TNFP01375 AC069257.2-201ENST00000441819 155 ntBASIC0.03□□□□□ -2.4
TNFP01375 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.03□□□□□ -2.4
TNFP01375 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.03□□□□□ -2.4
TNFP01375 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.03□□□□□ -2.4
TNFP01375 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.03□□□□□ -2.4
TNFP01375 AL031281.1-201ENST00000604049 488 ntBASIC0.03□□□□□ -2.4
TNFP01375 AL360219.1-201ENST00000610230 366 ntBASIC0.03□□□□□ -2.4
TNFP01375 AC021506.2-201ENST00000612354 169 ntBASIC0.03□□□□□ -2.4
TNFP01375 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.03□□□□□ -2.4
TNFP01375 MTND5P16-201ENST00000460269 1703 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms