Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC016907.1-201ENST00000419483 435 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 MTND1P1-201ENST00000445453 368 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 Y_RNA.693-201ENST00000516641 110 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 RNU7-193P-201ENST00000516723 65 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.37□□□□□ -2.03
GGPS1O95749 AC103987.3-201ENST00000582071 292 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AC025165.5-201ENST00000602802 578 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AC107304.1-201ENST00000604229 296 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 ELOCP5-201ENST00000604924 333 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 RNU6-85P-201ENST00000605989 107 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AL161423.1-201ENST00000613700 262 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 AC012640.5-201ENST00000623897 319 ntBASIC2.37□□□□□ -2.03
GGPS1O95749 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
GGPS1O95749 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
GGPS1O95749 RNU4-75P-201ENST00000364621 146 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-827P-201ENST00000365553 106 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-38P-201ENST00000384085 107 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 Y_RNA.436-201ENST00000384097 102 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-692P-201ENST00000384496 107 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-648P-201ENST00000410190 107 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
GGPS1O95749 AL445646.1-201ENST00000431784 216 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.36□□□□□ -2.03
GGPS1O95749 TPTE2P5-203ENST00000458118 728 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 snoU13.23-201ENST00000458863 104 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-333P-201ENST00000459117 107 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU7-138P-201ENST00000459479 64 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RPL38P4-201ENST00000502376 214 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.36□□□□□ -2.03
GGPS1O95749 AK3P2-201ENST00000507976 429 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 SNORA14.1-201ENST00000516113 141 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 RNU6-189P-201ENST00000516120 101 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.36□□□□□ -2.03
GGPS1O95749 AP000763.2-201ENST00000540641 163 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 AC103705.1-201ENST00000619013 241 ntBASIC2.36□□□□□ -2.03
GGPS1O95749 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
GGPS1O95749 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RNU6-1141P-201ENST00000364520 107 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RNU4-66P-201ENST00000365199 138 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RNU4-20P-201ENST00000365601 151 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GGPS1O95749 POLHP1-201ENST00000411806 470 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.35□□□□□ -2.03
GGPS1O95749 RPS15AP10-201ENST00000432472 382 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 SNAP23P1-201ENST00000433229 246 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.35□□□□□ -2.03
GGPS1O95749 AC019235.1-201ENST00000503847 207 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC009646.1-201ENST00000510455 318 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RNU5F-2P-201ENST00000516066 82 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 NDUFA5P6-201ENST00000542110 379 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC018630.3-201ENST00000542637 96 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC103996.1-201ENST00000555468 102 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AL118558.2-201ENST00000556294 238 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC004908.3-201ENST00000610248 625 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC009318.2-201ENST00000610917 651 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 AC093783.1-201ENST00000612976 329 ntBASIC2.35□□□□□ -2.03
GGPS1O95749 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
GGPS1O95749 RNU6-944P-201ENST00000364023 107 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 RNU4-40P-201ENST00000364351 143 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 RNU6-43P-201ENST00000384302 107 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 Y_RNA.517-201ENST00000384551 106 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
GGPS1O95749 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 RNU2-2P-201ENST00000410396 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.34□□□□□ -2.03
GGPS1O95749 DLGAP5P1-201ENST00000430307 464 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.34□□□□□ -2.03
GGPS1O95749 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.34□□□□□ -2.03
GGPS1O95749 AL031659.1-201ENST00000447075 539 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AC022447.4-201ENST00000504053 364 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AC091885.1-201ENST00000506658 268 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AL512360.1-201ENST00000555346 234 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.34□□□□□ -2.03
GGPS1O95749 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 AC009314.1-201ENST00000603871 304 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.15-201ENST00000611544 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.16-201ENST00000613119 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.12-201ENST00000613778 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.20-201ENST00000613956 192 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.9-201ENST00000615427 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.11-201ENST00000616345 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.2-201ENST00000616535 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.3-201ENST00000617785 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.19-201ENST00000618602 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 RNU2-1-201ENST00000618664 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.5-201ENST00000619465 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 U2.10-201ENST00000620268 191 ntBASIC2.34□□□□□ -2.03
GGPS1O95749 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GGPS1O95749 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GGPS1O95749 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
GGPS1O95749 AP000560.1-201ENST00000624150 1937 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AL356292.1-201ENST00000283110 373 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms