Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC108729.2-201ENST00000476543 840 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
SIX6O95475 MTCO3P28-201ENST00000513351 515 ntBASIC0.04□□□□□ -2.4
SIX6O95475 RNU6-237P-201ENST00000515985 71 ntBASIC0.04□□□□□ -2.4
SIX6O95475 RNU5F-2P-201ENST00000516066 82 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AC087854.1-201ENST00000519706 414 ntBASIC0.04□□□□□ -2.4
SIX6O95475 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.04□□□□□ -2.4
SIX6O95475 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.04□□□□□ -2.4
SIX6O95475 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.04□□□□□ -2.4
SIX6O95475 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.04□□□□□ -2.4
SIX6O95475 HMGN1P30-201ENST00000589286 268 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AC005332.6-201ENST00000613178 446 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AL138955.1-201ENST00000622881 1040 ntBASIC0.04□□□□□ -2.4
SIX6O95475 Z69720.2-201ENST00000624755 279 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.04□□□□□ -2.4
SIX6O95475 SNORD32B-201ENST00000364460 84 ntBASIC0.03□□□□□ -2.4
SIX6O95475 RNU1-133P-201ENST00000364867 167 ntBASIC0.03□□□□□ -2.4
SIX6O95475 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
SIX6O95475 SNORD116-20-201ENST00000384529 92 ntBASIC0.03□□□□□ -2.4
SIX6O95475 RNA5SP247-201ENST00000411181 105 ntBASIC0.03□□□□□ -2.4
SIX6O95475 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.03□□□□□ -2.4
SIX6O95475 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.03□□□□□ -2.4
SIX6O95475 AL353718.1-201ENST00000451028 517 ntBASIC0.03□□□□□ -2.4
SIX6O95475 AC003071.1-201ENST00000451219 789 ntBASIC0.03□□□□□ -2.4
SIX6O95475 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.03□□□□□ -2.4
SIX6O95475 AC104982.1-201ENST00000478775 574 ntBASIC0.03□□□□□ -2.4
SIX6O95475 RNU6-1223P-201ENST00000517124 104 ntBASIC0.03□□□□□ -2.4
SIX6O95475 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.03□□□□□ -2.4
SIX6O95475 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
SIX6O95475 AL132657.2-201ENST00000564417 358 ntBASIC0.03□□□□□ -2.4
SIX6O95475 AL589743.1-201ENST00000551932 2712 ntBASIC0.03□□□□□ -2.4
SIX6O95475 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SIX6O95475 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
SIX6O95475 SNORA25.9-201ENST00000365087 128 ntBASIC0.02□□□□□ -2.41
SIX6O95475 RNU6-481P-201ENST00000384194 107 ntBASIC0.02□□□□□ -2.41
SIX6O95475 MIR216A-201ENST00000385063 110 ntBASIC0.02□□□□□ -2.41
SIX6O95475 MTCO1P21-201ENST00000416634 589 ntBASIC0.02□□□□□ -2.41
SIX6O95475 MTCYBP5-201ENST00000423752 1135 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.02□□□□□ -2.41
SIX6O95475 DPRXP1-201ENST00000426312 460 ntBASIC0.02□□□□□ -2.41
SIX6O95475 RPL23AP95-201ENST00000426806 265 ntBASIC0.02□□□□□ -2.41
SIX6O95475 SEPT7P5-201ENST00000434048 306 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.02□□□□□ -2.41
SIX6O95475 MTND2P20-201ENST00000440805 661 ntBASIC0.02□□□□□ -2.41
SIX6O95475 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.02□□□□□ -2.41
SIX6O95475 AC092991.1-201ENST00000477176 376 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AC104806.1-201ENST00000508720 308 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.02□□□□□ -2.41
SIX6O95475 RNU6-922P-201ENST00000516753 99 ntBASIC0.02□□□□□ -2.41
SIX6O95475 RNU6-1315P-201ENST00000517187 99 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AC011979.2-201ENST00000527568 352 ntBASIC0.02□□□□□ -2.41
SIX6O95475 MIR4781-201ENST00000585250 76 ntBASIC0.02□□□□□ -2.41
SIX6O95475 AC092354.1-201ENST00000606057 376 ntBASIC0.02□□□□□ -2.41
SIX6O95475 PCMTD1P7-201ENST00000634506 357 ntBASIC0.02□□□□□ -2.41
SIX6O95475 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.01□□□□□ -2.41
SIX6O95475 RNU6-438P-201ENST00000365561 103 ntBASIC0.01□□□□□ -2.41
SIX6O95475 RNU6-817P-201ENST00000391083 104 ntBASIC0.01□□□□□ -2.41
SIX6O95475 SNORA12-201ENST00000391162 147 ntBASIC0.01□□□□□ -2.41
SIX6O95475 MIR936-201ENST00000401264 98 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AC027644.1-201ENST00000419595 298 ntBASIC0.01□□□□□ -2.41
SIX6O95475 MTCO2P1-201ENST00000424648 477 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AC005094.1-201ENST00000440420 368 ntBASIC0.01□□□□□ -2.41
SIX6O95475 DAP3P1-201ENST00000441522 278 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AL031313.1-201ENST00000448435 256 ntBASIC0.01□□□□□ -2.41
SIX6O95475 MTND1P31-201ENST00000449206 961 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.01□□□□□ -2.41
SIX6O95475 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.01□□□□□ -2.41
SIX6O95475 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.01□□□□□ -2.41
SIX6O95475 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.01□□□□□ -2.41
SIX6O95475 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.01□□□□□ -2.41
SIX6O95475 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.01□□□□□ -2.41
SIX6O95475 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.01□□□□□ -2.41
SIX6O95475 SLC2A13P1-201ENST00000531560 322 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.01□□□□□ -2.41
SIX6O95475 MIR3136-201ENST00000583498 78 ntBASIC0.01□□□□□ -2.41
SIX6O95475 AC006270.3-201ENST00000605967 1036 ntBASIC0.01□□□□□ -2.41
SIX6O95475 RNU6-45P-201ENST00000384471 107 ntBASIC0□□□□□ -2.41
SIX6O95475 SNORA16.2-201ENST00000390991 127 ntBASIC0□□□□□ -2.41
SIX6O95475 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
SIX6O95475 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0□□□□□ -2.41
SIX6O95475 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
SIX6O95475 MTND4P20-201ENST00000424125 869 ntBASIC0□□□□□ -2.41
SIX6O95475 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0□□□□□ -2.41
SIX6O95475 TAF9P1-201ENST00000445421 515 ntBASIC0□□□□□ -2.41
SIX6O95475 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0□□□□□ -2.41
SIX6O95475 TAF9P2-201ENST00000454958 515 ntBASIC0□□□□□ -2.41
SIX6O95475 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0□□□□□ -2.41
SIX6O95475 RNU7-90P-201ENST00000459216 62 ntBASIC0□□□□□ -2.41
SIX6O95475 snoU109.2-201ENST00000459316 135 ntBASIC0□□□□□ -2.41
SIX6O95475 RNU7-21P-201ENST00000459430 62 ntBASIC0□□□□□ -2.41
SIX6O95475 AC104563.1-201ENST00000476147 376 ntBASIC0□□□□□ -2.41
SIX6O95475 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0□□□□□ -2.41
SIX6O95475 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0□□□□□ -2.41
SIX6O95475 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0□□□□□ -2.41
SIX6O95475 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0□□□□□ -2.41
SIX6O95475 HIGD1AP17-201ENST00000554576 276 ntBASIC0□□□□□ -2.41
SIX6O95475 AL157871.3-201ENST00000557231 293 ntBASIC0□□□□□ -2.41
SIX6O95475 SNORA59B-202ENST00000578183 701 ntBASIC0□□□□□ -2.41
SIX6O95475 MIR5695-201ENST00000579717 85 ntBASIC0□□□□□ -2.41
SIX6O95475 MIR4431-201ENST00000579990 94 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms