Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.66□□□□□ -1.98
RTN3O95197 Z82209.1-201ENST00000422141 2135 ntBASIC2.66□□□□□ -1.98
RTN3O95197 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.98
RTN3O95197 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RTN3O95197 Y_RNA.100-201ENST00000363141 102 ntBASIC2.65□□□□□ -1.99
RTN3O95197 SNORD113-7-201ENST00000363762 77 ntBASIC2.65□□□□□ -1.99
RTN3O95197 RNU6-43P-201ENST00000384302 107 ntBASIC2.65□□□□□ -1.99
RTN3O95197 Y_RNA.530-201ENST00000384587 101 ntBASIC2.65□□□□□ -1.99
RTN3O95197 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
RTN3O95197 MIR450B-201ENST00000401182 78 ntBASIC2.65□□□□□ -1.99
RTN3O95197 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.65□□□□□ -1.99
RTN3O95197 MIR1277-201ENST00000408536 78 ntBASIC2.65□□□□□ -1.99
RTN3O95197 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.65□□□□□ -1.99
RTN3O95197 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.65□□□□□ -1.99
RTN3O95197 TRBVA-201ENST00000498804 316 ntBASIC2.65□□□□□ -1.99
RTN3O95197 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.65□□□□□ -1.99
RTN3O95197 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.65□□□□□ -1.99
RTN3O95197 AC104458.1-201ENST00000608243 463 ntBASIC2.65□□□□□ -1.99
RTN3O95197 AC064836.2-201ENST00000609491 462 ntBASIC2.65□□□□□ -1.99
RTN3O95197 FAM157A-202ENST00000615155 405 ntBASIC2.65□□□□□ -1.99
RTN3O95197 AC131280.1-202ENST00000624067 4211 ntBASIC2.65□□□□□ -1.99
RTN3O95197 AP000560.1-201ENST00000624150 1937 ntBASIC2.65□□□□□ -1.99
RTN3O95197 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTN3O95197 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RTN3O95197 RNU6-1032P-201ENST00000384100 107 ntBASIC2.64□□□□□ -1.99
RTN3O95197 MIR29B2-201ENST00000385055 81 ntBASIC2.64□□□□□ -1.99
RTN3O95197 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.64□□□□□ -1.99
RTN3O95197 UBE2V1P4-201ENST00000425374 344 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AL121890.1-201ENST00000435457 205 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.64□□□□□ -1.99
RTN3O95197 AC007547.1-201ENST00000462177 490 ntBASIC2.64□□□□□ -1.99
RTN3O95197 SNRPGP7-201ENST00000469016 106 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AC092989.1-201ENST00000481235 277 ntBASIC2.64□□□□□ -1.99
RTN3O95197 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
RTN3O95197 RN7SKP256-201ENST00000517201 314 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.64□□□□□ -1.99
RTN3O95197 AC104576.1-201ENST00000524225 88 ntBASIC2.64□□□□□ -1.99
RTN3O95197 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.64□□□□□ -1.99
RTN3O95197 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.64□□□□□ -1.99
RTN3O95197 AC100830.2-201ENST00000581636 240 ntBASIC2.64□□□□□ -1.99
RTN3O95197 AP001836.1-201ENST00000604675 523 ntBASIC2.64□□□□□ -1.99
RTN3O95197 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTN3O95197 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
RTN3O95197 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTN3O95197 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTN3O95197 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTN3O95197 RNU6-254P-201ENST00000363377 107 ntBASIC2.63□□□□□ -1.99
RTN3O95197 Y_RNA.157-201ENST00000363638 102 ntBASIC2.63□□□□□ -1.99
RTN3O95197 SNORD32A-201ENST00000364805 84 ntBASIC2.63□□□□□ -1.99
RTN3O95197 RNU6-128P-201ENST00000383976 107 ntBASIC2.63□□□□□ -1.99
RTN3O95197 Y_RNA.619-201ENST00000410951 90 ntBASIC2.63□□□□□ -1.99
RTN3O95197 AP000275.1-201ENST00000411943 390 ntBASIC2.63□□□□□ -1.99
RTN3O95197 MTND1P23-201ENST00000416931 372 ntBASIC2.63□□□□□ -1.99
RTN3O95197 RPS29P25-201ENST00000481709 171 ntBASIC2.63□□□□□ -1.99
RTN3O95197 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.63□□□□□ -1.99
RTN3O95197 AC022447.4-201ENST00000504053 364 ntBASIC2.63□□□□□ -1.99
RTN3O95197 YWHAEP4-201ENST00000505390 198 ntBASIC2.63□□□□□ -1.99
RTN3O95197 RNU5F-2P-201ENST00000516066 82 ntBASIC2.63□□□□□ -1.99
RTN3O95197 RNU6-1332P-201ENST00000516666 104 ntBASIC2.63□□□□□ -1.99
RTN3O95197 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.63□□□□□ -1.99
RTN3O95197 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.63□□□□□ -1.99
RTN3O95197 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
RTN3O95197 ELOCP5-201ENST00000604924 333 ntBASIC2.63□□□□□ -1.99
RTN3O95197 MIR3662-201ENST00000637030 95 ntBASIC2.63□□□□□ -1.99
RTN3O95197 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.63□□□□□ -1.99
RTN3O95197 MTND4P23-201ENST00000447723 1363 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
RTN3O95197 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RTN3O95197 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
RTN3O95197 MIR518C-201ENST00000384822 101 ntBASIC2.62□□□□□ -1.99
RTN3O95197 MIR561-201ENST00000385216 97 ntBASIC2.62□□□□□ -1.99
RTN3O95197 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RTN3O95197 RN7SKP158-201ENST00000410453 326 ntBASIC2.62□□□□□ -1.99
RTN3O95197 RN7SKP61-201ENST00000410642 295 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC009161.1-201ENST00000417306 376 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.62□□□□□ -1.99
RTN3O95197 RPL23AP95-201ENST00000426806 265 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC078809.1-201ENST00000427601 140 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC244670.1-201ENST00000436879 112 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.62□□□□□ -1.99
RTN3O95197 AL353752.1-201ENST00000454946 260 ntBASIC2.62□□□□□ -1.99
RTN3O95197 U8.21-201ENST00000459536 136 ntBASIC2.62□□□□□ -1.99
RTN3O95197 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.62□□□□□ -1.99
RTN3O95197 FAM206BP-201ENST00000510179 541 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.62□□□□□ -1.99
RTN3O95197 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.62□□□□□ -1.99
RTN3O95197 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.62□□□□□ -1.99
RTN3O95197 AP002770.2-201ENST00000543613 532 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC091544.4-201ENST00000555268 342 ntBASIC2.62□□□□□ -1.99
RTN3O95197 MIR3136-201ENST00000583498 78 ntBASIC2.62□□□□□ -1.99
RTN3O95197 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.62□□□□□ -1.99
RTN3O95197 AP003465.2-201ENST00000602571 373 ntBASIC2.62□□□□□ -1.99
RTN3O95197 CTHRC1P1-201ENST00000605383 469 ntBASIC2.62□□□□□ -1.99
RTN3O95197 AC084782.3-201ENST00000612282 578 ntBASIC2.62□□□□□ -1.99
RTN3O95197 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RTN3O95197 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RTN3O95197 snoU2_19.1-201ENST00000362361 80 ntBASIC2.61□□□□□ -1.99
RTN3O95197 RNU6-1274P-201ENST00000384557 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms