Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.16□□□□□ -1.9
SCAF4O95104 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
SCAF4O95104 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.16□□□□□ -1.9
SCAF4O95104 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCAF4O95104 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
SCAF4O95104 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCAF4O95104 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCAF4O95104 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SCAF4O95104 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.15□□□□□ -1.9
SCAF4O95104 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.15□□□□□ -1.91
SCAF4O95104 RNU6-280P-201ENST00000364145 104 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 RNU6-879P-201ENST00000364328 108 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 AL359837.1-201ENST00000381357 287 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 SNORA36A-201ENST00000384221 132 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 SNORA70C-201ENST00000384538 135 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 Y_RNA.555-201ENST00000384673 110 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.15□□□□□ -1.91
SCAF4O95104 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 BPY2DP-201ENST00000422208 265 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 AC006989.1-201ENST00000427212 131 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 AC004975.1-201ENST00000428733 208 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 AC005002.2-201ENST00000438228 269 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 RNA5SP164-201ENST00000516533 110 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
SCAF4O95104 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 MIR4423-201ENST00000580922 80 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.15□□□□□ -1.91
SCAF4O95104 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 U2.14-201ENST00000615943 113 ntBASIC3.15□□□□□ -1.91
SCAF4O95104 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.91
SCAF4O95104 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCAF4O95104 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.15□□□□□ -1.91
SCAF4O95104 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.14□□□□□ -1.91
SCAF4O95104 RNA5SP515-201ENST00000364570 118 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 Y_RNA.286-201ENST00000364813 102 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 Y_RNA.297-201ENST00000364950 91 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 RNU6-290P-201ENST00000365212 101 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 RNU6-281P-201ENST00000384212 103 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 UBA52P6-201ENST00000399822 382 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 SNORD12B-201ENST00000410433 91 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 RNU4-61P-201ENST00000411243 107 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC017079.2-201ENST00000416102 485 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC007389.2-201ENST00000434630 306 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 PRELID3BP1-201ENST00000457142 540 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 MED28P2-201ENST00000475771 317 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 SERF1AP1-201ENST00000514575 187 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.14□□□□□ -1.91
SCAF4O95104 AC021739.1-201ENST00000559631 174 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC090877.1-201ENST00000561418 344 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 UBL5P4-201ENST00000562584 236 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SCAF4O95104 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.14□□□□□ -1.91
SCAF4O95104 MIR3609-201ENST00000582661 80 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AL137849.1-201ENST00000604767 169 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 AC004792.1-201ENST00000614523 137 ntBASIC3.14□□□□□ -1.91
SCAF4O95104 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCAF4O95104 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCAF4O95104 Y_RNA.29-201ENST00000362570 113 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 RNU6-1141P-201ENST00000364520 107 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 Y_RNA.319-201ENST00000365138 92 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 Y_RNA.504-201ENST00000384481 104 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 RNU6-159P-201ENST00000391080 106 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 RN7SKP61-201ENST00000410642 295 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 SNORA57.3-201ENST00000411095 141 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.13□□□□□ -1.91
SCAF4O95104 WARS2P1-201ENST00000429678 537 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.13□□□□□ -1.91
SCAF4O95104 RPL21P129-201ENST00000491732 478 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 RN7SKP21-201ENST00000516503 220 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 RN7SKP49-201ENST00000516675 260 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 CKS1BP7-201ENST00000522230 235 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 HSPE1P4-201ENST00000550617 308 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.13□□□□□ -1.91
SCAF4O95104 MIR4425-201ENST00000580572 84 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.13□□□□□ -1.91
SCAF4O95104 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SCAF4O95104 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
SCAF4O95104 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCAF4O95104 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCAF4O95104 AC110491.1-201ENST00000562191 2010 ntBASIC3.12□□□□□ -1.91
SCAF4O95104 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCAF4O95104 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCAF4O95104 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCAF4O95104 RNU6-858P-201ENST00000362436 107 ntBASIC3.12□□□□□ -1.91
SCAF4O95104 Y_RNA.76-201ENST00000362931 109 ntBASIC3.12□□□□□ -1.91
SCAF4O95104 SNORD115-8-201ENST00000363856 82 ntBASIC3.12□□□□□ -1.91
SCAF4O95104 Y_RNA.180-201ENST00000363867 113 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms