Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.53□□□□□ -2.16
CLPXO76031 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.53□□□□□ -2.16
CLPXO76031 AC103987.3-201ENST00000582071 292 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.53□□□□□ -2.16
CLPXO76031 AP000654.2-201ENST00000605633 586 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC104073.3-201ENST00000610942 955 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC233981.2-201ENST00000611524 1614 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.53□□□□□ -2.16
CLPXO76031 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.16
CLPXO76031 FGF7P2-201ENST00000332473 296 ntBASIC1.52□□□□□ -2.17
CLPXO76031 Y_RNA.238-201ENST00000364441 102 ntBASIC1.52□□□□□ -2.17
CLPXO76031 RNU6-338P-201ENST00000383888 105 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLPXO76031 AL669831.1-202ENST00000428504 417 ntBASIC1.52□□□□□ -2.17
CLPXO76031 GTF2IP13-201ENST00000438487 386 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.52□□□□□ -2.17
CLPXO76031 AC003989.2-201ENST00000440224 169 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.52□□□□□ -2.17
CLPXO76031 AL022238.1-201ENST00000442557 355 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AL133217.1-201ENST00000450980 425 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AL162395.1-201ENST00000457882 422 ntBASIC1.52□□□□□ -2.17
CLPXO76031 SNORD42A-201ENST00000459584 64 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC104564.1-201ENST00000493028 407 ntBASIC1.52□□□□□ -2.17
CLPXO76031 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.52□□□□□ -2.17
CLPXO76031 AC022447.4-201ENST00000504053 364 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.52□□□□□ -2.17
CLPXO76031 RNU6-377P-201ENST00000515965 102 ntBASIC1.52□□□□□ -2.17
CLPXO76031 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLPXO76031 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
CLPXO76031 MIR3915-201ENST00000578518 97 ntBASIC1.52□□□□□ -2.17
CLPXO76031 MIR4775-201ENST00000581168 75 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC018889.1-201ENST00000605372 397 ntBASIC1.52□□□□□ -2.17
CLPXO76031 Z99289.3-201ENST00000605586 594 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC008945.2-201ENST00000606056 604 ntBASIC1.52□□□□□ -2.17
CLPXO76031 AC007494.3-201ENST00000624660 743 ntBASIC1.52□□□□□ -2.17
CLPXO76031 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLPXO76031 CBX3P1-201ENST00000325243 554 ntBASIC1.51□□□□□ -2.17
CLPXO76031 RNU4-21P-201ENST00000362802 126 ntBASIC1.51□□□□□ -2.17
CLPXO76031 RNU4-91P-201ENST00000364778 135 ntBASIC1.51□□□□□ -2.17
CLPXO76031 RNU6-1303P-201ENST00000364841 107 ntBASIC1.51□□□□□ -2.17
CLPXO76031 AL357139.1-201ENST00000407792 426 ntBASIC1.51□□□□□ -2.17
CLPXO76031 MIR1294-201ENST00000408503 142 ntBASIC1.51□□□□□ -2.17
CLPXO76031 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.51□□□□□ -2.17
CLPXO76031 RPL23AP36-201ENST00000413895 458 ntBASIC1.51□□□□□ -2.17
CLPXO76031 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AC132942.1-201ENST00000486753 483 ntBASIC1.51□□□□□ -2.17
CLPXO76031 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.51□□□□□ -2.17
CLPXO76031 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 SNORA18.6-201ENST00000516792 115 ntBASIC1.51□□□□□ -2.17
CLPXO76031 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
CLPXO76031 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.51□□□□□ -2.17
CLPXO76031 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AC023050.3-201ENST00000541142 333 ntBASIC1.51□□□□□ -2.17
CLPXO76031 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AC109446.2-201ENST00000567872 497 ntBASIC1.51□□□□□ -2.17
CLPXO76031 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
CLPXO76031 MIR3136-201ENST00000583498 78 ntBASIC1.51□□□□□ -2.17
CLPXO76031 MIR4760-201ENST00000585040 80 ntBASIC1.51□□□□□ -2.17
CLPXO76031 BNIP3P16-201ENST00000589779 534 ntBASIC1.51□□□□□ -2.17
CLPXO76031 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPXO76031 AL603755.1-201ENST00000619504 163 ntBASIC1.51□□□□□ -2.17
CLPXO76031 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLPXO76031 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.51□□□□□ -2.17
CLPXO76031 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CLPXO76031 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLPXO76031 Y_RNA.4-201ENST00000362333 112 ntBASIC1.5□□□□□ -2.17
CLPXO76031 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
CLPXO76031 RNU6-1285P-201ENST00000363480 105 ntBASIC1.5□□□□□ -2.17
CLPXO76031 RNU4-48P-201ENST00000365559 182 ntBASIC1.5□□□□□ -2.17
CLPXO76031 RNU6-1029P-201ENST00000384109 107 ntBASIC1.5□□□□□ -2.17
CLPXO76031 Y_RNA.480-201ENST00000384364 102 ntBASIC1.5□□□□□ -2.17
CLPXO76031 RNU6-160P-201ENST00000384591 107 ntBASIC1.5□□□□□ -2.17
CLPXO76031 MT-TH-201ENST00000387441 69 ntBASIC1.5□□□□□ -2.17
CLPXO76031 Y_RNA.595-201ENST00000410403 105 ntBASIC1.5□□□□□ -2.17
CLPXO76031 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.5□□□□□ -2.17
CLPXO76031 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLPXO76031 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.5□□□□□ -2.17
CLPXO76031 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.5□□□□□ -2.17
CLPXO76031 AC108729.3-201ENST00000513484 108 ntBASIC1.5□□□□□ -2.17
CLPXO76031 LRRC34P2-201ENST00000514850 553 ntBASIC1.5□□□□□ -2.17
CLPXO76031 COPS8P3-201ENST00000526024 482 ntBASIC1.5□□□□□ -2.17
CLPXO76031 TRAV32-201ENST00000553993 340 ntBASIC1.5□□□□□ -2.17
CLPXO76031 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.5□□□□□ -2.17
CLPXO76031 AL590229.1-201ENST00000603497 542 ntBASIC1.5□□□□□ -2.17
CLPXO76031 AL034555.1-201ENST00000604816 211 ntBASIC1.5□□□□□ -2.17
CLPXO76031 AC064872.1-201ENST00000604823 1072 ntBASIC1.5□□□□□ -2.17
CLPXO76031 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLPXO76031 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLPXO76031 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLPXO76031 AP000560.1-201ENST00000624150 1937 ntBASIC1.5□□□□□ -2.17
CLPXO76031 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
CLPXO76031 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.49□□□□□ -2.17
CLPXO76031 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLPXO76031 RNU6-37P-201ENST00000362692 107 ntBASIC1.49□□□□□ -2.17
CLPXO76031 RNU6-11P-201ENST00000364234 107 ntBASIC1.49□□□□□ -2.17
CLPXO76031 RNU6-25P-201ENST00000383873 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms