Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC234772.3-201ENST00000602277 528 ntBASIC1.34□□□□□ -2.19
BRD4O60885 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
BRD4O60885 RNU6-87P-201ENST00000607561 108 ntBASIC1.34□□□□□ -2.19
BRD4O60885 AC108747.1-201ENST00000609508 535 ntBASIC1.34□□□□□ -2.19
BRD4O60885 AC027807.2-201ENST00000616099 408 ntBASIC1.34□□□□□ -2.19
BRD4O60885 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.34□□□□□ -2.19
BRD4O60885 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
BRD4O60885 AC073343.1-201ENST00000328239 651 ntBASIC1.34□□□□□ -2.2
BRD4O60885 Y_RNA.68-201ENST00000362881 102 ntBASIC1.34□□□□□ -2.2
BRD4O60885 RNU6-898P-201ENST00000365627 104 ntBASIC1.34□□□□□ -2.2
BRD4O60885 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.34□□□□□ -2.2
BRD4O60885 RNU6-946P-201ENST00000383878 107 ntBASIC1.34□□□□□ -2.2
BRD4O60885 MTCYBP36-201ENST00000404146 440 ntBASIC1.34□□□□□ -2.2
BRD4O60885 RNU6-1025P-201ENST00000410629 104 ntBASIC1.34□□□□□ -2.2
BRD4O60885 RPL37P10-201ENST00000412884 288 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC009518.2-201ENST00000418056 731 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC010099.3-201ENST00000423896 409 ntBASIC1.34□□□□□ -2.2
BRD4O60885 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.34□□□□□ -2.2
BRD4O60885 AC119618.1-201ENST00000434191 222 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AL008629.1-201ENST00000438615 184 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.34□□□□□ -2.2
BRD4O60885 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.34□□□□□ -2.2
BRD4O60885 RNA5SP384-201ENST00000516615 116 ntBASIC1.34□□□□□ -2.2
BRD4O60885 RNU6-914P-201ENST00000516749 109 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC009902.1-201ENST00000519351 183 ntBASIC1.34□□□□□ -2.2
BRD4O60885 ZNF519P3-201ENST00000557158 1032 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.34□□□□□ -2.2
BRD4O60885 AC002400.1-201ENST00000569310 726 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC022022.2-201ENST00000602989 360 ntBASIC1.34□□□□□ -2.2
BRD4O60885 AC105129.3-201ENST00000605455 485 ntBASIC1.34□□□□□ -2.2
BRD4O60885 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.33□□□□□ -2.2
BRD4O60885 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
BRD4O60885 Y_RNA.33-201ENST00000362591 102 ntBASIC1.33□□□□□ -2.2
BRD4O60885 SNORD56.2-201ENST00000363242 71 ntBASIC1.33□□□□□ -2.2
BRD4O60885 RNU6-611P-201ENST00000384276 104 ntBASIC1.33□□□□□ -2.2
BRD4O60885 HIGD1AP15-201ENST00000416198 280 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.33□□□□□ -2.2
BRD4O60885 CBX3P6-201ENST00000430257 527 ntBASIC1.33□□□□□ -2.2
BRD4O60885 RPL23AP30-201ENST00000432419 501 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AC003071.1-201ENST00000451219 789 ntBASIC1.33□□□□□ -2.2
BRD4O60885 MTND1P12-201ENST00000455231 147 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AC023194.1-201ENST00000493084 308 ntBASIC1.33□□□□□ -2.2
BRD4O60885 SNORA31.19-201ENST00000517079 126 ntBASIC1.33□□□□□ -2.2
BRD4O60885 RNU6-1315P-201ENST00000517187 99 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AC087854.1-201ENST00000519706 414 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.33□□□□□ -2.2
BRD4O60885 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.33□□□□□ -2.2
BRD4O60885 RPL30P11-203ENST00000598995 310 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AL031775.1-201ENST00000607014 887 ntBASIC1.33□□□□□ -2.2
BRD4O60885 MIR15A-201ENST00000607334 83 ntBASIC1.33□□□□□ -2.2
BRD4O60885 AC096772.1-201ENST00000609146 564 ntBASIC1.33□□□□□ -2.2
BRD4O60885 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
BRD4O60885 RNU6-500P-201ENST00000362349 107 ntBASIC1.32□□□□□ -2.2
BRD4O60885 Y_RNA.251-201ENST00000364551 99 ntBASIC1.32□□□□□ -2.2
BRD4O60885 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 Y_RNA.534-201ENST00000384599 112 ntBASIC1.32□□□□□ -2.2
BRD4O60885 SNORA40C-201ENST00000391285 128 ntBASIC1.32□□□□□ -2.2
BRD4O60885 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
BRD4O60885 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
BRD4O60885 AL133475.1-201ENST00000404414 305 ntBASIC1.32□□□□□ -2.2
BRD4O60885 MIR1262-201ENST00000408276 93 ntBASIC1.32□□□□□ -2.2
BRD4O60885 Y_RNA.608-201ENST00000410647 95 ntBASIC1.32□□□□□ -2.2
BRD4O60885 RPL21P90-201ENST00000415692 466 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AL593851.1-201ENST00000426171 157 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.32□□□□□ -2.2
BRD4O60885 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.32□□□□□ -2.2
BRD4O60885 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.32□□□□□ -2.2
BRD4O60885 AC012308.1-201ENST00000451232 178 ntBASIC1.32□□□□□ -2.2
BRD4O60885 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.32□□□□□ -2.2
BRD4O60885 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.32□□□□□ -2.2
BRD4O60885 AC010587.1-201ENST00000505809 469 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
BRD4O60885 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.32□□□□□ -2.2
BRD4O60885 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.32□□□□□ -2.2
BRD4O60885 AL157871.3-201ENST00000557231 293 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.32□□□□□ -2.2
BRD4O60885 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.32□□□□□ -2.2
BRD4O60885 AC112191.3-201ENST00000604371 277 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AL158032.1-201ENST00000605401 106 ntBASIC1.32□□□□□ -2.2
BRD4O60885 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AL359547.2-201ENST00000615810 418 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AC009878.1-201ENST00000621819 340 ntBASIC1.32□□□□□ -2.2
BRD4O60885 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.32□□□□□ -2.2
BRD4O60885 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.31□□□□□ -2.2
BRD4O60885 CBX3P1-201ENST00000325243 554 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU6-858P-201ENST00000362436 107 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU5F-6P-201ENST00000362979 116 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU6-395P-201ENST00000365662 106 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU6-190P-201ENST00000384154 102 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNU2-48P-201ENST00000410694 191 ntBASIC1.31□□□□□ -2.2
BRD4O60885 MTND5P2-201ENST00000442927 1142 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AP000797.1-201ENST00000478870 387 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RPL7P43-201ENST00000478876 753 ntBASIC1.31□□□□□ -2.2
BRD4O60885 RNA5SP337-201ENST00000517007 109 ntBASIC1.31□□□□□ -2.2
BRD4O60885 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms