Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 Y_RNA.632-201ENST00000459189 102 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 SNRPGP7-201ENST00000469016 106 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RPL30P12-201ENST00000474666 353 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.85□□□□□ -1.95
CCNT1O60563 AC091874.1-201ENST00000511402 339 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RNA5SP148-201ENST00000516527 94 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RNU6-1016P-201ENST00000516689 94 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RNU6-612P-201ENST00000516909 102 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 AC010186.2-204ENST00000537668 439 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 IMMP1LP2-201ENST00000552954 492 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 AC019193.3-201ENST00000609144 554 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 AL359314.1-201ENST00000616913 261 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 MIR3529-201ENST00000637713 78 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNT1O60563 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 MTND4P29-201ENST00000503122 1372 ntBASIC2.85□□□□□ -1.95
CCNT1O60563 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCNT1O60563 RNU6-622P-201ENST00000384272 103 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 RNU6-933P-201ENST00000384424 107 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 MIR521-1-201ENST00000384902 87 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 MIR23A-201ENST00000385245 73 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCNT1O60563 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCNT1O60563 AL513475.1-201ENST00000406602 315 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.84□□□□□ -1.95
CCNT1O60563 OSTCP8-201ENST00000445117 448 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNT1O60563 RPS29P27-201ENST00000463711 170 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNT1O60563 Y_RNA.670-201ENST00000516255 105 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 RNU1-54P-201ENST00000517181 120 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 APOOP3-201ENST00000536787 586 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 GLYCAM1-201ENST00000546596 285 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNT1O60563 CPDP1-201ENST00000579660 283 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNT1O60563 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.84□□□□□ -1.95
CCNT1O60563 RPL23AP78-201ENST00000599928 470 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AC124303.1-201ENST00000605703 360 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNT1O60563 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.84□□□□□ -1.95
CCNT1O60563 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCNT1O60563 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.84□□□□□ -1.96
CCNT1O60563 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCNT1O60563 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.96
CCNT1O60563 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCNT1O60563 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCNT1O60563 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCNT1O60563 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
CCNT1O60563 RNU4-79P-201ENST00000362764 141 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 SNORD116-29-201ENST00000384516 83 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 MIR544A-201ENST00000384855 91 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 NCOR1P3-201ENST00000420479 303 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 Z98742.2-201ENST00000431564 187 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AL133396.1-201ENST00000432048 687 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AL031659.1-201ENST00000447075 539 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC112771.1-201ENST00000463581 102 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC133134.1-201ENST00000466800 359 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 RPL7P42-201ENST00000481005 679 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNT1O60563 AC026782.1-201ENST00000512952 449 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.83□□□□□ -1.96
CCNT1O60563 AP005902.1-201ENST00000521358 186 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 MTCO3P13-201ENST00000577757 781 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC090897.2-201ENST00000581715 130 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.83□□□□□ -1.96
CCNT1O60563 BNIP3P16-201ENST00000589779 534 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 RPS15AP11-201ENST00000594193 385 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 RPL12P50-201ENST00000603116 116 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC018462.2-201ENST00000605375 395 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNT1O60563 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 KPNA2P1-201ENST00000458289 1591 ntBASIC2.83□□□□□ -1.96
CCNT1O60563 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCNT1O60563 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
CCNT1O60563 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
CCNT1O60563 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 RNU6-842P-201ENST00000384269 107 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 Y_RNA.594-201ENST00000410373 140 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 RNU6-1328P-201ENST00000410938 106 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 AL358075.3-201ENST00000426289 226 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 U8.21-201ENST00000459536 136 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.82□□□□□ -1.96
CCNT1O60563 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.82□□□□□ -1.96
CCNT1O60563 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.82□□□□□ -1.96
CCNT1O60563 AP001836.1-201ENST00000604675 523 ntBASIC2.82□□□□□ -1.96
CCNT1O60563 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCNT1O60563 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCNT1O60563 MAPK10-266ENST00000641066 6555 ntBASIC2.81□□□□□ -1.96
CCNT1O60563 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCNT1O60563 Y_RNA.387-201ENST00000383918 102 ntBASIC2.81□□□□□ -1.96
CCNT1O60563 Y_RNA.404-201ENST00000383978 102 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms